Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.12□□□□□ -0.47
CCL13Q99616 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.12□□□□□ -0.47
CCL13Q99616 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CCL13Q99616 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CCL13Q99616 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CCL13Q99616 FAM90A7P-201ENST00000382628 1395 ntBASIC12.11□□□□□ -0.47
CCL13Q99616 FAM90A23P-201ENST00000400136 1395 ntBASIC12.11□□□□□ -0.47
CCL13Q99616 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
CCL13Q99616 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.11□□□□□ -0.47
CCL13Q99616 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CCL13Q99616 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.11□□□□□ -0.47
CCL13Q99616 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.11□□□□□ -0.47
CCL13Q99616 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.11□□□□□ -0.47
CCL13Q99616 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.11□□□□□ -0.47
CCL13Q99616 AC124068.2-201ENST00000569473 1109 ntBASIC12.11□□□□□ -0.47
CCL13Q99616 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.11□□□□□ -0.47
CCL13Q99616 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.11□□□□□ -0.47
CCL13Q99616 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CCL13Q99616 AC092299.1-201ENST00000632679 757 ntBASIC12.11□□□□□ -0.47
CCL13Q99616 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CCL13Q99616 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL13Q99616 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.11□□□□□ -0.47
CCL13Q99616 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL13Q99616 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
CCL13Q99616 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CCL13Q99616 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.1□□□□□ -0.47
CCL13Q99616 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CCL13Q99616 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL13Q99616 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.1□□□□□ -0.47
CCL13Q99616 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.1□□□□□ -0.47
CCL13Q99616 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL13Q99616 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL13Q99616 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.1□□□□□ -0.47
CCL13Q99616 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL13Q99616 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL13Q99616 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL13Q99616 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.1□□□□□ -0.47
CCL13Q99616 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.1□□□□□ -0.47
CCL13Q99616 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.1□□□□□ -0.47
CCL13Q99616 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL13Q99616 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CCL13Q99616 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.1□□□□□ -0.47
CCL13Q99616 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL13Q99616 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCL13Q99616 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CCL13Q99616 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.1□□□□□ -0.47
CCL13Q99616 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CCL13Q99616 ST13P19-201ENST00000442505 1124 ntBASIC12.1□□□□□ -0.47
CCL13Q99616 EIF4HP1-201ENST00000453115 687 ntBASIC12.1□□□□□ -0.47
CCL13Q99616 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.1□□□□□ -0.47
CCL13Q99616 AC013355.1-201ENST00000562625 723 ntBASIC12.1□□□□□ -0.47
CCL13Q99616 SNORD3B-2-202ENST00000571722 791 ntBASIC12.1□□□□□ -0.47
CCL13Q99616 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.1□□□□□ -0.47
CCL13Q99616 AC021016.3-201ENST00000608367 477 ntBASIC12.1□□□□□ -0.47
CCL13Q99616 AP000346.4-201ENST00000614827 381 ntBASIC12.1□□□□□ -0.47
CCL13Q99616 GPR182-203ENST00000622922 591 ntBASIC12.1□□□□□ -0.47
CCL13Q99616 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.1□□□□□ -0.47
CCL13Q99616 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms