Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EYA3Q99504 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.34■□□□□ 0.37
EYA3Q99504 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC17.34■□□□□ 0.37
EYA3Q99504 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.34■□□□□ 0.37
EYA3Q99504 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.34■□□□□ 0.37
EYA3Q99504 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.34■□□□□ 0.37
EYA3Q99504 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.34■□□□□ 0.37
EYA3Q99504 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC17.34■□□□□ 0.37
EYA3Q99504 PCDHA3-202ENST00000532566 4594 ntBASIC17.34■□□□□ 0.37
EYA3Q99504 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EYA3Q99504 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
EYA3Q99504 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EYA3Q99504 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EYA3Q99504 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.33■□□□□ 0.37
EYA3Q99504 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EYA3Q99504 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
EYA3Q99504 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EYA3Q99504 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EYA3Q99504 ODCP-201ENST00000459650 1639 ntBASIC17.33■□□□□ 0.37
EYA3Q99504 AL672207.1-201ENST00000328462 1570 ntBASIC17.33■□□□□ 0.37
EYA3Q99504 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
EYA3Q99504 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
EYA3Q99504 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EYA3Q99504 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.33■□□□□ 0.36
EYA3Q99504 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC17.33■□□□□ 0.36
EYA3Q99504 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
EYA3Q99504 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
EYA3Q99504 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.33■□□□□ 0.36
EYA3Q99504 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EYA3Q99504 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EYA3Q99504 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EYA3Q99504 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EYA3Q99504 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
EYA3Q99504 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.33■□□□□ 0.36
EYA3Q99504 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC17.33■□□□□ 0.36
EYA3Q99504 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC17.33■□□□□ 0.36
EYA3Q99504 KRT17P4-201ENST00000429445 819 ntBASIC17.33■□□□□ 0.36
EYA3Q99504 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.33■□□□□ 0.36
EYA3Q99504 VENTXP3-201ENST00000546480 773 ntBASIC17.33■□□□□ 0.36
EYA3Q99504 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC17.33■□□□□ 0.36
EYA3Q99504 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.33■□□□□ 0.36
EYA3Q99504 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.33■□□□□ 0.36
EYA3Q99504 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
EYA3Q99504 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.33■□□□□ 0.36
EYA3Q99504 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.33■□□□□ 0.36
EYA3Q99504 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
EYA3Q99504 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.33■□□□□ 0.36
EYA3Q99504 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.33■□□□□ 0.36
EYA3Q99504 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.33■□□□□ 0.36
EYA3Q99504 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EYA3Q99504 AC019109.1-201ENST00000401725 1874 ntBASIC17.33■□□□□ 0.36
EYA3Q99504 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EYA3Q99504 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EYA3Q99504 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.33■□□□□ 0.36
EYA3Q99504 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.32■□□□□ 0.36
EYA3Q99504 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
EYA3Q99504 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
EYA3Q99504 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 KRT8P18-201ENST00000413425 1445 ntBASIC17.32■□□□□ 0.36
EYA3Q99504 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
EYA3Q99504 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
EYA3Q99504 FUCA1P1-201ENST00000374476 1351 ntBASIC17.32■□□□□ 0.36
EYA3Q99504 DBET-201ENST00000630918 3363 ntBASIC17.32■□□□□ 0.36
EYA3Q99504 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
EYA3Q99504 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
EYA3Q99504 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
EYA3Q99504 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
EYA3Q99504 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.32■□□□□ 0.36
EYA3Q99504 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.32■□□□□ 0.36
EYA3Q99504 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC17.32■□□□□ 0.36
EYA3Q99504 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.32■□□□□ 0.36
EYA3Q99504 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.32■□□□□ 0.36
EYA3Q99504 SLC25A15P3-201ENST00000505530 290 ntBASIC17.32■□□□□ 0.36
EYA3Q99504 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC17.32■□□□□ 0.36
EYA3Q99504 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.32■□□□□ 0.36
EYA3Q99504 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
EYA3Q99504 MIR4265-201ENST00000582152 99 ntBASIC17.32■□□□□ 0.36
EYA3Q99504 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.32■□□□□ 0.36
EYA3Q99504 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.32■□□□□ 0.36
EYA3Q99504 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
EYA3Q99504 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
EYA3Q99504 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.32■□□□□ 0.36
EYA3Q99504 TSPY26P-202ENST00000565928 3884 ntBASIC17.32■□□□□ 0.36
EYA3Q99504 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.32■□□□□ 0.36
EYA3Q99504 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
EYA3Q99504 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EYA3Q99504 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms