Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 AC005089.1-201ENST00000619486 2241 ntBASIC14.68□□□□□ -0.06
PHOX2BQ99453 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 TRIM36-IT1-201ENST00000503723 881 ntBASIC14.68□□□□□ -0.06
PHOX2BQ99453 AC026434.2-201ENST00000506094 1078 ntBASIC14.68□□□□□ -0.06
PHOX2BQ99453 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 AC114947.1-202ENST00000514136 344 ntBASIC14.68□□□□□ -0.06
PHOX2BQ99453 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 RN7SL357P-201ENST00000581065 298 ntBASIC14.68□□□□□ -0.06
PHOX2BQ99453 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 AC006483.2-201ENST00000609813 515 ntBASIC14.68□□□□□ -0.06
PHOX2BQ99453 MIR6720-201ENST00000611664 98 ntBASIC14.68□□□□□ -0.06
PHOX2BQ99453 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PHOX2BQ99453 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHOX2BQ99453 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.67□□□□□ -0.06
PHOX2BQ99453 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 AC068867.1-201ENST00000559855 150 ntBASIC14.67□□□□□ -0.06
PHOX2BQ99453 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 AL603764.1-201ENST00000636452 321 ntBASIC14.67□□□□□ -0.06
PHOX2BQ99453 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 CICP14-201ENST00000629111 2732 ntBASIC14.67□□□□□ -0.06
PHOX2BQ99453 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PHOX2BQ99453 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHOX2BQ99453 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms