Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 AL022313.4-201ENST00000562756 2046 ntBASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 GEMIN8P4-201ENST00000380526 729 ntBASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 ACTBP14-201ENST00000411655 1089 ntBASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 RN7SL288P-201ENST00000490496 291 ntBASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 AC090505.1-201ENST00000430515 1834 ntBASIC17.31■□□□□ 0.36
CRAMP1Q96RY5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 AF274858.1-201ENST00000406288 372 ntBASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 BAK1P2-201ENST00000532665 631 ntBASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 AC023968.2-201ENST00000560593 1049 ntBASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 NAV1-210ENST00000593583 726 ntBASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 AC005274.1-201ENST00000623460 802 ntBASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CRAMP1Q96RY5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 CICP14-201ENST00000629111 2732 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 323.6 ms