Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 MARK2P9-201ENST00000430958 1727 ntBASIC16.22■□□□□ 0.19
TNFRSF25Q93038 AL590824.1-201ENST00000403828 1349 ntBASIC16.22■□□□□ 0.19
TNFRSF25Q93038 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 NCLP1-201ENST00000445357 1963 ntBASIC16.22■□□□□ 0.19
TNFRSF25Q93038 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 AC244452.3-201ENST00000636814 210 ntBASIC16.22■□□□□ 0.19
TNFRSF25Q93038 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF25Q93038 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 DUX4L50-201ENST00000455245 715 ntBASIC16.21■□□□□ 0.19
TNFRSF25Q93038 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 KRT8P1-201ENST00000557533 1207 ntBASIC16.21■□□□□ 0.19
TNFRSF25Q93038 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 AC244093.1-201ENST00000610837 814 ntBASIC16.21■□□□□ 0.19
TNFRSF25Q93038 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF25Q93038 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TNFRSF25Q93038 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TNFRSF25Q93038 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TNFRSF25Q93038 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TNFRSF25Q93038 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.21■□□□□ 0.18
TNFRSF25Q93038 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms