Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RTN4IP1Q8WWV3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 STRCP1-201ENST00000509801 5328 ntBASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 AC134312.5-201ENST00000568031 1313 ntBASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 AC026434.2-201ENST00000506094 1078 ntBASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 AC068587.3-201ENST00000526613 355 ntBASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 MSTO2P-201ENST00000314835 1709 ntBASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.23□□□□□ -0.45
RTN4IP1Q8WWV3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 AC072061.1-201ENST00000569710 2234 ntBASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 AC003102.2-201ENST00000589195 1469 ntBASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms