Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 AP000346.2-202ENST00000425948 383 ntBASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 NME6-211ENST00000447314 621 ntTSL 3 BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 AL358115.1-202ENST00000455257 675 ntTSL 3 BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 CMC2-202ENST00000486645 766 ntTSL 3 BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 MIR2277-201ENST00000515916 93 ntBASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 AC147067.2-201ENST00000608161 289 ntBASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 MIR7848-201ENST00000617402 101 ntBASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 uc_338.24-201ENST00000617802 182 ntBASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 AC080080.1-201ENST00000625121 2420 ntBASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTBP4Q8N2S1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 AC024075.2-201ENST00000598112 1473 ntBASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 FTH1P19-201ENST00000402402 528 ntBASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 HMGA1P1-201ENST00000415560 1062 ntBASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 AC103706.1-201ENST00000561761 679 ntBASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 MT1G-204ENST00000569500 305 ntTSL 3 BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 WSB1-213ENST00000583193 552 ntTSL 4 BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 AC020763.2-201ENST00000623155 1255 ntBASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 MKRN7P-201ENST00000433469 1371 ntBASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC18.94■□□□□ 0.62
LTBP4Q8N2S1 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 AC079944.2-201ENST00000478867 734 ntBASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 AC020893.2-201ENST00000506083 723 ntBASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 RN7SL750P-201ENST00000582814 238 ntBASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 AC073585.1-201ENST00000368895 1328 ntBASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTBP4Q8N2S1 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 TSACC-206ENST00000466306 477 ntTSL 3 BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 TUBAP-201ENST00000425085 1352 ntBASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 AC020658.6-201ENST00000623564 1870 ntBASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LTBP4Q8N2S1 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms