Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 KRT8P35-201ENST00000483942 1338 ntBASIC12.93□□□□□ -0.34
LRRC28Q86X40 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 GPR53P-205ENST00000457298 1084 ntBASIC12.93□□□□□ -0.34
LRRC28Q86X40 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 SLC25A47P1-201ENST00000531577 414 ntBASIC12.93□□□□□ -0.34
LRRC28Q86X40 KRT17P8-201ENST00000540749 863 ntBASIC12.93□□□□□ -0.34
LRRC28Q86X40 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 MIR5189-201ENST00000577370 114 ntBASIC12.93□□□□□ -0.34
LRRC28Q86X40 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 AC005252.2-201ENST00000624630 1141 ntBASIC12.93□□□□□ -0.34
LRRC28Q86X40 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 AL139385.1-201ENST00000611744 3272 ntBASIC12.93□□□□□ -0.34
LRRC28Q86X40 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 CES1P1-201ENST00000421606 1704 ntBASIC12.93□□□□□ -0.34
LRRC28Q86X40 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LRRC28Q86X40 AC118758.2-201ENST00000614242 2813 ntBASIC12.93□□□□□ -0.34
LRRC28Q86X40 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRC28Q86X40 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 AL365181.3-201ENST00000605886 3222 ntBASIC12.92□□□□□ -0.34
LRRC28Q86X40 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms