Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 AC099521.3-201ENST00000624251 2938 ntBASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 NKAIN1P1-201ENST00000435754 582 ntBASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 ST13P19-201ENST00000442505 1124 ntBASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 AC005740.2-201ENST00000511085 419 ntBASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 AC010326.4-201ENST00000604665 891 ntBASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 AL606495.2-201ENST00000605867 535 ntBASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 AL451050.2-201ENST00000606967 682 ntBASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 AC244093.1-201ENST00000610837 814 ntBASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 AP000346.4-201ENST00000614827 381 ntBASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 CFTRP2-201ENST00000634304 199 ntBASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSMD3Q7Z3D4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 AC027612.1-201ENST00000445234 2395 ntBASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 AC020910.6-201ENST00000623084 1459 ntBASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 KRT18P36-201ENST00000411618 1276 ntBASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 ZNF767P-206ENST00000513792 565 ntBASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 AC013355.1-201ENST00000562625 723 ntBASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 MIR3615-201ENST00000581999 87 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms