Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 AL954722.1-201ENST00000431238 259 ntBASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 ST13P19-201ENST00000442505 1124 ntBASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 SNRPD2P2-201ENST00000473818 333 ntBASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 EEF1GP8-201ENST00000506566 1154 ntBASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 SIRPB3P-201ENST00000340424 1216 ntBASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 FAM21EP-201ENST00000417804 985 ntBASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 STK33P1-201ENST00000423835 1218 ntBASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 HMGA1P2-201ENST00000430198 324 ntBASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 RN7SL363P-201ENST00000482412 273 ntBASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 NDUFB10P1-201ENST00000567319 521 ntBASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 AL021707.6-201ENST00000609212 491 ntBASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 AC073869.4-201ENST00000620841 800 ntBASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 AC048382.6-201ENST00000621980 1223 ntBASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 LILRP1-201ENST00000444199 1370 ntBASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC13.82□□□□□ -0.2
RSPO4Q2I0M5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms