Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKL1Q00532 FAM90A12P-201ENST00000519497 2375 ntBASIC14.27□□□□□ -0.13
CDKL1Q00532 FAM90A24P-201ENST00000520792 2369 ntBASIC14.27□□□□□ -0.13
CDKL1Q00532 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.27□□□□□ -0.13
CDKL1Q00532 AC023794.5-201ENST00000564380 2157 ntBASIC14.27□□□□□ -0.13
CDKL1Q00532 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKL1Q00532 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CDKL1Q00532 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKL1Q00532 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKL1Q00532 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKL1Q00532 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
CDKL1Q00532 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CDKL1Q00532 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.27□□□□□ -0.13
CDKL1Q00532 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.27□□□□□ -0.13
CDKL1Q00532 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKL1Q00532 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDKL1Q00532 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.27□□□□□ -0.13
CDKL1Q00532 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CDKL1Q00532 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.26□□□□□ -0.13
CDKL1Q00532 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDKL1Q00532 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDKL1Q00532 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.26□□□□□ -0.13
CDKL1Q00532 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.26□□□□□ -0.13
CDKL1Q00532 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDKL1Q00532 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.26□□□□□ -0.13
CDKL1Q00532 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDKL1Q00532 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 MIR326-201ENST00000362220 95 ntBASIC14.26□□□□□ -0.13
CDKL1Q00532 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CDKL1Q00532 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.26□□□□□ -0.13
CDKL1Q00532 AL161932.2-201ENST00000435436 679 ntBASIC14.26□□□□□ -0.13
CDKL1Q00532 AC234783.1-201ENST00000441761 496 ntBASIC14.26□□□□□ -0.13
CDKL1Q00532 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.26□□□□□ -0.13
CDKL1Q00532 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.26□□□□□ -0.13
CDKL1Q00532 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.26□□□□□ -0.13
CDKL1Q00532 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.26□□□□□ -0.13
CDKL1Q00532 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
CDKL1Q00532 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.26□□□□□ -0.13
CDKL1Q00532 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
CDKL1Q00532 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKL1Q00532 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CDKL1Q00532 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.26□□□□□ -0.13
CDKL1Q00532 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.26□□□□□ -0.13
CDKL1Q00532 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDKL1Q00532 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 CICP16-201ENST00000502609 2813 ntBASIC14.25□□□□□ -0.13
CDKL1Q00532 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CDKL1Q00532 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.25□□□□□ -0.13
CDKL1Q00532 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.25□□□□□ -0.13
CDKL1Q00532 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.25□□□□□ -0.13
CDKL1Q00532 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.25□□□□□ -0.13
CDKL1Q00532 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.25□□□□□ -0.13
CDKL1Q00532 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.25□□□□□ -0.13
CDKL1Q00532 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.25□□□□□ -0.13
CDKL1Q00532 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.25□□□□□ -0.13
CDKL1Q00532 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.25□□□□□ -0.13
CDKL1Q00532 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.25□□□□□ -0.13
CDKL1Q00532 KRT17P8-201ENST00000540749 863 ntBASIC14.25□□□□□ -0.13
CDKL1Q00532 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.25□□□□□ -0.13
CDKL1Q00532 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.25□□□□□ -0.13
CDKL1Q00532 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.25□□□□□ -0.13
CDKL1Q00532 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
CDKL1Q00532 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.25□□□□□ -0.13
CDKL1Q00532 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.25□□□□□ -0.13
CDKL1Q00532 AC132192.2-201ENST00000596206 1147 ntBASIC14.25□□□□□ -0.13
CDKL1Q00532 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CDKL1Q00532 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms