Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 CICP17-201ENST00000418553 2377 ntBASIC12.76□□□□□ -0.37
RAB1AP62820 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.76□□□□□ -0.37
RAB1AP62820 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB1AP62820 ACTBP11-201ENST00000436287 1126 ntBASIC12.76□□□□□ -0.37
RAB1AP62820 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB1AP62820 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB1AP62820 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.76□□□□□ -0.37
RAB1AP62820 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB1AP62820 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 RBM8B-201ENST00000555532 525 ntBASIC12.76□□□□□ -0.37
RAB1AP62820 AC005730.2-201ENST00000564549 1184 ntBASIC12.76□□□□□ -0.37
RAB1AP62820 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.76□□□□□ -0.37
RAB1AP62820 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.76□□□□□ -0.37
RAB1AP62820 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RAB1AP62820 AC007663.3-201ENST00000609632 465 ntBASIC12.76□□□□□ -0.37
RAB1AP62820 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 AC005695.3-201ENST00000614522 232 ntBASIC12.76□□□□□ -0.37
RAB1AP62820 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB1AP62820 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB1AP62820 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
RAB1AP62820 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB1AP62820 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RAB1AP62820 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB1AP62820 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB1AP62820 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
RAB1AP62820 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 RN7SL832P-201ENST00000607781 1756 ntBASIC12.76□□□□□ -0.37
RAB1AP62820 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB1AP62820 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB1AP62820 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RAB1AP62820 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB1AP62820 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB1AP62820 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
RAB1AP62820 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB1AP62820 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB1AP62820 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RAB1AP62820 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RAB1AP62820 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
RAB1AP62820 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RAB1AP62820 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
RAB1AP62820 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB1AP62820 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB1AP62820 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 AL645933.1-201ENST00000440087 609 ntBASIC12.75□□□□□ -0.37
RAB1AP62820 KLF2P1-201ENST00000447438 1042 ntBASIC12.75□□□□□ -0.37
RAB1AP62820 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB1AP62820 RNMTL1P1-201ENST00000454103 560 ntBASIC12.75□□□□□ -0.37
RAB1AP62820 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.75□□□□□ -0.37
RAB1AP62820 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB1AP62820 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB1AP62820 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB1AP62820 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RAB1AP62820 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RAB1AP62820 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.75□□□□□ -0.37
RAB1AP62820 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB1AP62820 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB1AP62820 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
RAB1AP62820 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RAB1AP62820 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.75□□□□□ -0.37
RAB1AP62820 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RAB1AP62820 TMBIM7P-202ENST00000641474 1516 ntBASIC12.75□□□□□ -0.37
RAB1AP62820 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB1AP62820 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms