Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
VBP1P61758 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.97□□□□□ -0.33
VBP1P61758 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.97□□□□□ -0.33
VBP1P61758 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.97□□□□□ -0.33
VBP1P61758 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 GAPDHP40-201ENST00000505218 1006 ntBASIC12.97□□□□□ -0.33
VBP1P61758 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.97□□□□□ -0.33
VBP1P61758 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.97□□□□□ -0.33
VBP1P61758 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.97□□□□□ -0.33
VBP1P61758 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.97□□□□□ -0.33
VBP1P61758 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.97□□□□□ -0.33
VBP1P61758 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
VBP1P61758 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.97□□□□□ -0.33
VBP1P61758 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
VBP1P61758 AC092902.6-201ENST00000641783 218 ntBASIC12.97□□□□□ -0.33
VBP1P61758 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VBP1P61758 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
VBP1P61758 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
VBP1P61758 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VBP1P61758 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 AC007614.4-201ENST00000564048 1827 ntBASIC12.97□□□□□ -0.33
VBP1P61758 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
VBP1P61758 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
VBP1P61758 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.96□□□□□ -0.33
VBP1P61758 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
VBP1P61758 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
VBP1P61758 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 AL645937.2-201ENST00000396808 931 ntBASIC12.96□□□□□ -0.33
VBP1P61758 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.96□□□□□ -0.33
VBP1P61758 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 AL353779.1-201ENST00000434793 351 ntBASIC12.96□□□□□ -0.33
VBP1P61758 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
VBP1P61758 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.96□□□□□ -0.33
VBP1P61758 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VBP1P61758 AL079307.3-201ENST00000556114 283 ntBASIC12.96□□□□□ -0.33
VBP1P61758 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.96□□□□□ -0.33
VBP1P61758 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.96□□□□□ -0.33
VBP1P61758 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
VBP1P61758 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VBP1P61758 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VBP1P61758 PTPRVP-205ENST00000641549 5067 ntBASIC12.96□□□□□ -0.33
VBP1P61758 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VBP1P61758 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
VBP1P61758 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VBP1P61758 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
VBP1P61758 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.95□□□□□ -0.34
VBP1P61758 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.95□□□□□ -0.34
VBP1P61758 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
VBP1P61758 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.95□□□□□ -0.34
VBP1P61758 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VBP1P61758 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms