Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC10.24□□□□□ -0.77
CKS1BP61024 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
CKS1BP61024 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
CKS1BP61024 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
CKS1BP61024 MIR940-201ENST00000401276 94 ntBASIC10.24□□□□□ -0.77
CKS1BP61024 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC10.24□□□□□ -0.77
CKS1BP61024 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC10.24□□□□□ -0.77
CKS1BP61024 MKNK2P1-201ENST00000437526 628 ntBASIC10.24□□□□□ -0.77
CKS1BP61024 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC10.24□□□□□ -0.77
CKS1BP61024 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC10.24□□□□□ -0.77
CKS1BP61024 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC10.24□□□□□ -0.77
CKS1BP61024 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC10.24□□□□□ -0.77
CKS1BP61024 BX640515.1-201ENST00000617215 977 ntBASIC10.24□□□□□ -0.77
CKS1BP61024 AC084121.4-201ENST00000641598 221 ntBASIC10.24□□□□□ -0.77
CKS1BP61024 AF228730.8-201ENST00000642140 221 ntBASIC10.24□□□□□ -0.77
CKS1BP61024 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
CKS1BP61024 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.24□□□□□ -0.77
CKS1BP61024 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 AC068760.1-201ENST00000493579 1953 ntBASIC10.24□□□□□ -0.77
CKS1BP61024 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 BLZF1-201ENST00000329281 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 KRT8P12-202ENST00000472924 1397 ntBASIC10.24□□□□□ -0.77
CKS1BP61024 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 AC138969.3-201ENST00000546612 1459 ntBASIC10.23□□□□□ -0.77
CKS1BP61024 AC138932.2-201ENST00000548268 1459 ntBASIC10.23□□□□□ -0.77
CKS1BP61024 AC126755.4-201ENST00000549796 1459 ntBASIC10.23□□□□□ -0.77
CKS1BP61024 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
CKS1BP61024 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 SF1-209ENST00000433274 2317 ntTSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.23□□□□□ -0.77
CKS1BP61024 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
CKS1BP61024 AC126564.1-201ENST00000623628 2013 ntBASIC10.23□□□□□ -0.77
CKS1BP61024 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
CKS1BP61024 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC10.23□□□□□ -0.77
CKS1BP61024 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
CKS1BP61024 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 SPDYE17-201ENST00000412399 783 ntBASIC10.23□□□□□ -0.77
CKS1BP61024 MCCD1P2-201ENST00000423228 335 ntBASIC10.23□□□□□ -0.77
CKS1BP61024 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.23□□□□□ -0.77
CKS1BP61024 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 CCND1-203ENST00000536559 553 ntTSL 3 BASIC10.23□□□□□ -0.77
CKS1BP61024 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC10.23□□□□□ -0.77
CKS1BP61024 MTDHP5-201ENST00000598980 586 ntBASIC10.23□□□□□ -0.77
CKS1BP61024 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC10.23□□□□□ -0.77
CKS1BP61024 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.23□□□□□ -0.77
CKS1BP61024 RN7SL828P-201ENST00000607615 303 ntBASIC10.23□□□□□ -0.77
CKS1BP61024 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 AL645728.2-202ENST00000641679 227 ntBASIC10.23□□□□□ -0.77
CKS1BP61024 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC10.23□□□□□ -0.77
CKS1BP61024 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
CKS1BP61024 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 CSPG4P12-201ENST00000558282 4853 ntBASIC10.23□□□□□ -0.77
CKS1BP61024 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms