Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 AL355075.4-201ENST00000554988 638 ntBASIC10.8□□□□□ -0.68
HIST1H2BDP58876 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 SORD2P-201ENST00000558556 1069 ntBASIC10.8□□□□□ -0.68
HIST1H2BDP58876 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 MIR4497-201ENST00000583208 89 ntBASIC10.8□□□□□ -0.68
HIST1H2BDP58876 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 RASAL1-203ENST00000446861 3040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 ATF4P4-201ENST00000393544 1930 ntBASIC10.8□□□□□ -0.68
HIST1H2BDP58876 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 KCTD21-AS1-207ENST00000600795 1549 ntBASIC10.79□□□□□ -0.68
HIST1H2BDP58876 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 ATP2C2-201ENST00000262429 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 PEX7-202ENST00000367756 680 ntTSL 3 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 USP17L6P-201ENST00000382470 1197 ntBASIC10.79□□□□□ -0.68
HIST1H2BDP58876 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 HOMER2P1-201ENST00000455653 964 ntBASIC10.79□□□□□ -0.68
HIST1H2BDP58876 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 IRX5-204ENST00000560154 879 ntTSL 5 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 MIR5787-201ENST00000611784 55 ntBASIC10.79□□□□□ -0.68
HIST1H2BDP58876 AC083849.1-201ENST00000615227 514 ntBASIC10.79□□□□□ -0.68
HIST1H2BDP58876 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms