Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.62□□□□□ -0.39
FOXG1P55316 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.62□□□□□ -0.39
FOXG1P55316 AC126755.1-201ENST00000525846 6405 ntBASIC12.62□□□□□ -0.39
FOXG1P55316 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 AL136379.1-201ENST00000623471 2642 ntBASIC12.61□□□□□ -0.39
FOXG1P55316 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.61□□□□□ -0.39
FOXG1P55316 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 BRD7P5-201ENST00000299197 1822 ntBASIC12.61□□□□□ -0.39
FOXG1P55316 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.61□□□□□ -0.39
FOXG1P55316 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.61□□□□□ -0.39
FOXG1P55316 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.61□□□□□ -0.39
FOXG1P55316 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.61□□□□□ -0.39
FOXG1P55316 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 IMP3P2-201ENST00000489760 475 ntBASIC12.61□□□□□ -0.39
FOXG1P55316 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 AC245884.6-201ENST00000515672 1067 ntBASIC12.61□□□□□ -0.39
FOXG1P55316 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.61□□□□□ -0.39
FOXG1P55316 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.61□□□□□ -0.39
FOXG1P55316 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.61□□□□□ -0.39
FOXG1P55316 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 FGFR3P5-201ENST00000564496 886 ntBASIC12.61□□□□□ -0.39
FOXG1P55316 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.61□□□□□ -0.39
FOXG1P55316 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
FOXG1P55316 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.61□□□□□ -0.39
FOXG1P55316 LINC00115-201ENST00000473798 1317 ntBASIC12.61□□□□□ -0.39
FOXG1P55316 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FOXG1P55316 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.6□□□□□ -0.39
FOXG1P55316 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
FOXG1P55316 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
FOXG1P55316 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.6□□□□□ -0.39
FOXG1P55316 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.6□□□□□ -0.39
FOXG1P55316 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.6□□□□□ -0.39
FOXG1P55316 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
FOXG1P55316 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 OR2K2-202ENST00000374428 1038 ntBASIC12.6□□□□□ -0.39
FOXG1P55316 AL662890.1-201ENST00000396818 632 ntBASIC12.6□□□□□ -0.39
FOXG1P55316 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.6□□□□□ -0.39
FOXG1P55316 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.6□□□□□ -0.39
FOXG1P55316 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.6□□□□□ -0.39
FOXG1P55316 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms