Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCKAP1LP55160 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NCKAP1LP55160 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCKAP1LP55160 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCKAP1LP55160 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.72■□□□□ 0.11
NCKAP1LP55160 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCKAP1LP55160 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NCKAP1LP55160 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCKAP1LP55160 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 AC006335.1-201ENST00000445200 547 ntBASIC15.71■□□□□ 0.11
NCKAP1LP55160 AC012618.1-201ENST00000461223 412 ntBASIC15.71■□□□□ 0.11
NCKAP1LP55160 AC022494.1-201ENST00000466044 728 ntBASIC15.71■□□□□ 0.11
NCKAP1LP55160 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 AC116345.2-201ENST00000512837 523 ntBASIC15.71■□□□□ 0.11
NCKAP1LP55160 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 AC138627.1-207ENST00000641560 1006 ntBASIC15.71■□□□□ 0.11
NCKAP1LP55160 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 AL365209.1-201ENST00000624418 6473 ntBASIC15.71■□□□□ 0.11
NCKAP1LP55160 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCKAP1LP55160 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 MYO15B-237ENST00000642007 4893 ntBASIC15.71■□□□□ 0.11
NCKAP1LP55160 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NCKAP1LP55160 AC117489.1-201ENST00000625169 3217 ntBASIC15.71■□□□□ 0.11
NCKAP1LP55160 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NCKAP1LP55160 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NCKAP1LP55160 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.71■□□□□ 0.1
NCKAP1LP55160 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
NCKAP1LP55160 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
NCKAP1LP55160 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
NCKAP1LP55160 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NCKAP1LP55160 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 AL157996.1-201ENST00000624684 2299 ntBASIC15.7■□□□□ 0.1
NCKAP1LP55160 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 AL133338.1-201ENST00000565695 1517 ntBASIC15.7■□□□□ 0.1
NCKAP1LP55160 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 HMGA1P1-201ENST00000415560 1062 ntBASIC15.7■□□□□ 0.1
NCKAP1LP55160 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 POU5F1P2-201ENST00000521750 823 ntBASIC15.7■□□□□ 0.1
NCKAP1LP55160 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 KRT8P1-201ENST00000557533 1207 ntBASIC15.7■□□□□ 0.1
NCKAP1LP55160 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 RN7SL574P-201ENST00000581512 297 ntBASIC15.7■□□□□ 0.1
NCKAP1LP55160 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.7■□□□□ 0.1
NCKAP1LP55160 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms