Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 AP001269.4-201ENST00000609611 512 ntBASIC12.23□□□□□ -0.45
NKX2-5P52952 BAP1-211ENST00000615113 489 ntBASIC12.23□□□□□ -0.45
NKX2-5P52952 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-5P52952 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-5P52952 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-5P52952 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-5P52952 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.23□□□□□ -0.45
NKX2-5P52952 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-5P52952 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-5P52952 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-5P52952 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
NKX2-5P52952 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-5P52952 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC12.23□□□□□ -0.45
NKX2-5P52952 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX2-5P52952 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-5P52952 AC010336.1-201ENST00000539278 4739 ntBASIC12.23□□□□□ -0.45
NKX2-5P52952 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX2-5P52952 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NKX2-5P52952 RBFOX1-224ENST00000641259 3651 ntBASIC12.23□□□□□ -0.45
NKX2-5P52952 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-5P52952 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX2-5P52952 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
NKX2-5P52952 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.23□□□□□ -0.45
NKX2-5P52952 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-5P52952 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
NKX2-5P52952 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX2-5P52952 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
NKX2-5P52952 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX2-5P52952 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.22□□□□□ -0.45
NKX2-5P52952 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
NKX2-5P52952 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC12.22□□□□□ -0.45
NKX2-5P52952 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX2-5P52952 MYL9-201ENST00000279022 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
NKX2-5P52952 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX2-5P52952 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX2-5P52952 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
NKX2-5P52952 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX2-5P52952 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.22□□□□□ -0.45
NKX2-5P52952 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX2-5P52952 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX2-5P52952 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
NKX2-5P52952 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX2-5P52952 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX2-5P52952 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX2-5P52952 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NKX2-5P52952 DET1-205ENST00000558413 583 ntTSL 4 BASIC12.22□□□□□ -0.45
NKX2-5P52952 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX2-5P52952 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 AL031432.2-201ENST00000566714 459 ntBASIC12.22□□□□□ -0.45
NKX2-5P52952 AL928711.1-201ENST00000570165 459 ntBASIC12.22□□□□□ -0.45
NKX2-5P52952 AC015910.1-201ENST00000579400 975 ntBASIC12.22□□□□□ -0.45
NKX2-5P52952 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX2-5P52952 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX2-5P52952 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX2-5P52952 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX2-5P52952 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX2-5P52952 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX2-5P52952 AL713866.1-201ENST00000563320 3125 ntBASIC12.22□□□□□ -0.45
NKX2-5P52952 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NKX2-5P52952 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
NKX2-5P52952 ACOX3-201ENST00000356406 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX2-5P52952 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-5P52952 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-5P52952 PRRX1-207ENST00000497230 3501 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX2-5P52952 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NKX2-5P52952 ATP2C2-201ENST00000262429 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-5P52952 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-5P52952 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-5P52952 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-5P52952 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NKX2-5P52952 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-5P52952 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NKX2-5P52952 DGKZP1-201ENST00000378718 2776 ntBASIC12.21□□□□□ -0.45
NKX2-5P52952 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.21□□□□□ -0.45
NKX2-5P52952 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-5P52952 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX2-5P52952 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX2-5P52952 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms