Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
UBE2AP49459 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
UBE2AP49459 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 ACKR1-201ENST00000368121 1240 ntBASIC9.25□□□□□ -0.93
UBE2AP49459 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 B9D1-203ENST00000395615 805 ntTSL 3 BASIC9.25□□□□□ -0.93
UBE2AP49459 AP006294.1-201ENST00000415407 339 ntBASIC9.25□□□□□ -0.93
UBE2AP49459 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 AC002472.2-201ENST00000442739 958 ntBASIC9.25□□□□□ -0.93
UBE2AP49459 AL355864.2-201ENST00000447420 863 ntBASIC9.25□□□□□ -0.93
UBE2AP49459 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 ELK1P1-201ENST00000485699 580 ntBASIC9.25□□□□□ -0.93
UBE2AP49459 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 AC011495.1-201ENST00000498085 584 ntBASIC9.25□□□□□ -0.93
UBE2AP49459 AC026434.2-201ENST00000506094 1078 ntBASIC9.25□□□□□ -0.93
UBE2AP49459 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC9.25□□□□□ -0.93
UBE2AP49459 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC9.25□□□□□ -0.93
UBE2AP49459 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 AC092135.3-201ENST00000624151 1846 ntBASIC9.25□□□□□ -0.93
UBE2AP49459 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
UBE2AP49459 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
UBE2AP49459 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
UBE2AP49459 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
UBE2AP49459 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
UBE2AP49459 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
UBE2AP49459 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
UBE2AP49459 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
UBE2AP49459 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
UBE2AP49459 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE2AP49459 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
UBE2AP49459 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC9.24□□□□□ -0.93
UBE2AP49459 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 AC097359.2-201ENST00000604992 2389 ntBASIC9.24□□□□□ -0.93
UBE2AP49459 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
UBE2AP49459 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC9.24□□□□□ -0.93
UBE2AP49459 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
UBE2AP49459 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
UBE2AP49459 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
UBE2AP49459 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
UBE2AP49459 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC9.24□□□□□ -0.93
UBE2AP49459 AGER-206ENST00000375070 1463 ntTSL 5 BASIC9.24□□□□□ -0.93
UBE2AP49459 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms