Protein–RNA interactions for Protein: P48728

AMT, Aminomethyltransferase, mitochondrial, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMTP48728 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AMTP48728 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
AMTP48728 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
AMTP48728 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AMTP48728 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
AMTP48728 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC10.97□□□□□ -0.65
AMTP48728 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC10.97□□□□□ -0.65
AMTP48728 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
AMTP48728 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
AMTP48728 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AMTP48728 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AMTP48728 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
AMTP48728 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
AMTP48728 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AMTP48728 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AMTP48728 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
AMTP48728 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC10.96□□□□□ -0.65
AMTP48728 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC10.96□□□□□ -0.65
AMTP48728 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 LPO-204ENST00000543544 2350 ntTSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 FAM90A11P-201ENST00000518378 2218 ntBASIC10.96□□□□□ -0.65
AMTP48728 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.96□□□□□ -0.65
AMTP48728 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC10.96□□□□□ -0.65
AMTP48728 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 ZBTB45P1-201ENST00000452761 1456 ntBASIC10.96□□□□□ -0.65
AMTP48728 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 AL590627.1-203ENST00000421194 1026 ntBASIC10.96□□□□□ -0.65
AMTP48728 AL353705.2-201ENST00000428243 662 ntBASIC10.96□□□□□ -0.65
AMTP48728 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC10.96□□□□□ -0.65
AMTP48728 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC10.96□□□□□ -0.65
AMTP48728 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
AMTP48728 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
AMTP48728 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC10.96□□□□□ -0.65
AMTP48728 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC10.96□□□□□ -0.65
AMTP48728 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.96□□□□□ -0.65
AMTP48728 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.96□□□□□ -0.65
AMTP48728 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC10.96□□□□□ -0.65
AMTP48728 AC140113.2-201ENST00000604370 208 ntBASIC10.96□□□□□ -0.65
AMTP48728 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC10.96□□□□□ -0.65
AMTP48728 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC10.96□□□□□ -0.65
AMTP48728 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
AMTP48728 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC10.96□□□□□ -0.66
AMTP48728 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
AMTP48728 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
AMTP48728 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
AMTP48728 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
AMTP48728 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC10.96□□□□□ -0.66
AMTP48728 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
AMTP48728 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
AMTP48728 AL157996.1-201ENST00000624684 2299 ntBASIC10.96□□□□□ -0.66
AMTP48728 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
AMTP48728 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
AMTP48728 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
AMTP48728 AP002008.2-201ENST00000635926 4870 ntBASIC10.96□□□□□ -0.66
AMTP48728 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
AMTP48728 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
AMTP48728 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
AMTP48728 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
AMTP48728 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
AMTP48728 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.66
AMTP48728 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC10.96□□□□□ -0.66
AMTP48728 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
AMTP48728 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
AMTP48728 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
AMTP48728 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.95□□□□□ -0.66
AMTP48728 PCDHB19P-202ENST00000625133 2914 ntBASIC10.95□□□□□ -0.66
AMTP48728 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
AMTP48728 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
AMTP48728 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
AMTP48728 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
AMTP48728 AP3S2-216ENST00000617003 1561 ntBASIC10.95□□□□□ -0.66
AMTP48728 AL607033.1-201ENST00000623900 1599 ntBASIC10.95□□□□□ -0.66
AMTP48728 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
AMTP48728 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
AMTP48728 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms