Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CEACAM3P40198 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC11.86□□□□□ -0.51
CEACAM3P40198 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC11.86□□□□□ -0.51
CEACAM3P40198 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CEACAM3P40198 AC104982.3-201ENST00000581995 514 ntBASIC11.86□□□□□ -0.51
CEACAM3P40198 KLK3-211ENST00000597483 810 ntTSL 2 BASIC11.86□□□□□ -0.51
CEACAM3P40198 AC007663.3-201ENST00000609632 465 ntBASIC11.86□□□□□ -0.51
CEACAM3P40198 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC11.86□□□□□ -0.51
CEACAM3P40198 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CEACAM3P40198 AL162426.1-201ENST00000624141 743 ntBASIC11.86□□□□□ -0.51
CEACAM3P40198 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CEACAM3P40198 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CEACAM3P40198 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.86□□□□□ -0.51
CEACAM3P40198 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.86□□□□□ -0.51
CEACAM3P40198 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.86□□□□□ -0.51
CEACAM3P40198 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
CEACAM3P40198 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.86□□□□□ -0.51
CEACAM3P40198 AC215219.1-201ENST00000400706 1817 ntBASIC11.86□□□□□ -0.51
CEACAM3P40198 PTPRVP-205ENST00000641549 5067 ntBASIC11.86□□□□□ -0.51
CEACAM3P40198 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC11.86□□□□□ -0.51
CEACAM3P40198 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CEACAM3P40198 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC11.86□□□□□ -0.51
CEACAM3P40198 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CEACAM3P40198 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.85□□□□□ -0.51
CEACAM3P40198 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CEACAM3P40198 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CEACAM3P40198 AC007191.1-201ENST00000623179 2995 ntBASIC11.85□□□□□ -0.51
CEACAM3P40198 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CEACAM3P40198 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.85□□□□□ -0.51
CEACAM3P40198 AC244394.1-201ENST00000435000 1665 ntBASIC11.85□□□□□ -0.51
CEACAM3P40198 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CEACAM3P40198 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 MIR663B-201ENST00000408361 115 ntBASIC11.85□□□□□ -0.51
CEACAM3P40198 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC11.85□□□□□ -0.51
CEACAM3P40198 HNRNPA1P63-201ENST00000427917 963 ntBASIC11.85□□□□□ -0.51
CEACAM3P40198 AL157407.1-201ENST00000435784 904 ntBASIC11.85□□□□□ -0.51
CEACAM3P40198 GOLGA2P4-201ENST00000441462 777 ntBASIC11.85□□□□□ -0.51
CEACAM3P40198 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC11.85□□□□□ -0.51
CEACAM3P40198 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC11.85□□□□□ -0.51
CEACAM3P40198 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC11.85□□□□□ -0.51
CEACAM3P40198 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.85□□□□□ -0.51
CEACAM3P40198 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
CEACAM3P40198 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC11.85□□□□□ -0.51
CEACAM3P40198 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.85□□□□□ -0.51
CEACAM3P40198 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CEACAM3P40198 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.85□□□□□ -0.51
CEACAM3P40198 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CEACAM3P40198 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CEACAM3P40198 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CEACAM3P40198 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
CEACAM3P40198 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
CEACAM3P40198 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CEACAM3P40198 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
CEACAM3P40198 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
CEACAM3P40198 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.84□□□□□ -0.51
CEACAM3P40198 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CEACAM3P40198 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms