Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.38□□□□□ -0.43
CDKN1AP38936 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.38□□□□□ -0.43
CDKN1AP38936 AL512430.1-201ENST00000392575 860 ntBASIC12.38□□□□□ -0.43
CDKN1AP38936 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 KRT18P36-201ENST00000411618 1276 ntBASIC12.38□□□□□ -0.43
CDKN1AP38936 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.38□□□□□ -0.43
CDKN1AP38936 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.38□□□□□ -0.43
CDKN1AP38936 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.38□□□□□ -0.43
CDKN1AP38936 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.38□□□□□ -0.43
CDKN1AP38936 AP000358.1-201ENST00000456260 156 ntBASIC12.38□□□□□ -0.43
CDKN1AP38936 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.38□□□□□ -0.43
CDKN1AP38936 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.38□□□□□ -0.43
CDKN1AP38936 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.38□□□□□ -0.43
CDKN1AP38936 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.38□□□□□ -0.43
CDKN1AP38936 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.38□□□□□ -0.43
CDKN1AP38936 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.38□□□□□ -0.43
CDKN1AP38936 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.38□□□□□ -0.43
CDKN1AP38936 AC087045.2-201ENST00000606279 1003 ntBASIC12.38□□□□□ -0.43
CDKN1AP38936 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.38□□□□□ -0.43
CDKN1AP38936 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.38□□□□□ -0.43
CDKN1AP38936 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CDKN1AP38936 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
CDKN1AP38936 AL109954.1-202ENST00000564051 2148 ntBASIC12.38□□□□□ -0.43
CDKN1AP38936 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CDKN1AP38936 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.38□□□□□ -0.43
CDKN1AP38936 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.38□□□□□ -0.43
CDKN1AP38936 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CDKN1AP38936 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.38□□□□□ -0.43
CDKN1AP38936 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
CDKN1AP38936 KRT18P9-201ENST00000604826 1300 ntBASIC12.37□□□□□ -0.43
CDKN1AP38936 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CDKN1AP38936 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.37□□□□□ -0.43
CDKN1AP38936 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.37□□□□□ -0.43
CDKN1AP38936 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.37□□□□□ -0.43
CDKN1AP38936 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.37□□□□□ -0.43
CDKN1AP38936 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CDKN1AP38936 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.37□□□□□ -0.43
CDKN1AP38936 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.37□□□□□ -0.43
CDKN1AP38936 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
CDKN1AP38936 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC12.37□□□□□ -0.43
CDKN1AP38936 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.37□□□□□ -0.43
CDKN1AP38936 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.37□□□□□ -0.43
CDKN1AP38936 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.37□□□□□ -0.43
CDKN1AP38936 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.37□□□□□ -0.43
CDKN1AP38936 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC12.37□□□□□ -0.43
CDKN1AP38936 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.37□□□□□ -0.43
CDKN1AP38936 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.37□□□□□ -0.43
CDKN1AP38936 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.37□□□□□ -0.43
CDKN1AP38936 NPM1P43-201ENST00000558669 786 ntBASIC12.37□□□□□ -0.43
CDKN1AP38936 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 MIR3188-201ENST00000583494 85 ntBASIC12.37□□□□□ -0.43
CDKN1AP38936 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.37□□□□□ -0.43
CDKN1AP38936 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 KRT8P28-201ENST00000433288 1390 ntBASIC12.37□□□□□ -0.43
CDKN1AP38936 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CDKN1AP38936 SBF1P1-201ENST00000444527 5631 ntBASIC12.37□□□□□ -0.43
CDKN1AP38936 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.37□□□□□ -0.43
CDKN1AP38936 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.37□□□□□ -0.43
CDKN1AP38936 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.37□□□□□ -0.43
CDKN1AP38936 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CDKN1AP38936 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.37□□□□□ -0.43
CDKN1AP38936 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CDKN1AP38936 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms