Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AL157996.1-201ENST00000624684 2299 ntBASIC15.28■□□□□ 0.04
CHRNA3P32297 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.28■□□□□ 0.04
CHRNA3P32297 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.28■□□□□ 0.04
CHRNA3P32297 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRNA3P32297 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.27■□□□□ 0.04
CHRNA3P32297 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.27■□□□□ 0.04
CHRNA3P32297 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.27■□□□□ 0.04
CHRNA3P32297 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRNA3P32297 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
CHRNA3P32297 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRNA3P32297 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRNA3P32297 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CHRNA3P32297 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.27■□□□□ 0.04
CHRNA3P32297 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRNA3P32297 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA3P32297 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.27■□□□□ 0.04
CHRNA3P32297 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
CHRNA3P32297 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA3P32297 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.27■□□□□ 0.03
CHRNA3P32297 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.27■□□□□ 0.03
CHRNA3P32297 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CHRNA3P32297 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA3P32297 AGAP10P-201ENST00000454844 2418 ntBASIC15.27■□□□□ 0.03
CHRNA3P32297 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA3P32297 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.27■□□□□ 0.03
CHRNA3P32297 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CHRNA3P32297 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA3P32297 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA3P32297 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA3P32297 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA3P32297 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA3P32297 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA3P32297 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA3P32297 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CHRNA3P32297 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CHRNA3P32297 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CHRNA3P32297 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.26■□□□□ 0.03
CHRNA3P32297 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.26■□□□□ 0.03
CHRNA3P32297 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.26■□□□□ 0.03
CHRNA3P32297 MIR4741-201ENST00000579822 90 ntBASIC15.26■□□□□ 0.03
CHRNA3P32297 MIR4538-201ENST00000581377 78 ntBASIC15.26■□□□□ 0.03
CHRNA3P32297 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CHRNA3P32297 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.26■□□□□ 0.03
CHRNA3P32297 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.26■□□□□ 0.03
CHRNA3P32297 AC138696.2-201ENST00000607376 223 ntBASIC15.26■□□□□ 0.03
CHRNA3P32297 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CHRNA3P32297 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms