Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
HOXC13P31276 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HOXC13P31276 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HOXC13P31276 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HOXC13P31276 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HOXC13P31276 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HOXC13P31276 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC13P31276 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC13P31276 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.83□□□□□ -0.04
HOXC13P31276 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.83□□□□□ -0.04
HOXC13P31276 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.83□□□□□ -0.04
HOXC13P31276 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.83□□□□□ -0.04
HOXC13P31276 DNM1P30-201ENST00000563586 452 ntBASIC14.83□□□□□ -0.04
HOXC13P31276 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.83□□□□□ -0.04
HOXC13P31276 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.83□□□□□ -0.04
HOXC13P31276 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.83□□□□□ -0.04
HOXC13P31276 AC005041.3-201ENST00000606287 649 ntBASIC14.83□□□□□ -0.04
HOXC13P31276 AC025262.2-201ENST00000623975 1056 ntBASIC14.83□□□□□ -0.04
HOXC13P31276 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 CCT8L1P-201ENST00000465400 1674 ntBASIC14.83□□□□□ -0.04
HOXC13P31276 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
HOXC13P31276 AC090643.2-201ENST00000623442 2029 ntBASIC14.83□□□□□ -0.04
HOXC13P31276 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC13P31276 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC13P31276 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.83□□□□□ -0.04
HOXC13P31276 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC13P31276 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC13P31276 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC13P31276 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC13P31276 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HOXC13P31276 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.82□□□□□ -0.04
HOXC13P31276 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.82□□□□□ -0.04
HOXC13P31276 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HOXC13P31276 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HOXC13P31276 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC13P31276 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HOXC13P31276 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.82□□□□□ -0.04
HOXC13P31276 AC234644.1-201ENST00000406065 370 ntBASIC14.82□□□□□ -0.04
HOXC13P31276 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC13P31276 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.82□□□□□ -0.04
HOXC13P31276 RPL7P35-201ENST00000446943 740 ntBASIC14.82□□□□□ -0.04
HOXC13P31276 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HOXC13P31276 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC13P31276 AC140658.4-201ENST00000561990 352 ntBASIC14.82□□□□□ -0.04
HOXC13P31276 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.82□□□□□ -0.04
HOXC13P31276 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.82□□□□□ -0.04
HOXC13P31276 SIGLEC18P-201ENST00000602271 909 ntBASIC14.82□□□□□ -0.04
HOXC13P31276 AC005632.3-201ENST00000605544 308 ntBASIC14.82□□□□□ -0.04
HOXC13P31276 AC107464.3-201ENST00000609172 737 ntBASIC14.82□□□□□ -0.04
HOXC13P31276 MIR6858-201ENST00000620733 67 ntBASIC14.82□□□□□ -0.04
HOXC13P31276 AC073911.3-201ENST00000624401 631 ntBASIC14.82□□□□□ -0.04
HOXC13P31276 AC005618.3-201ENST00000624928 458 ntBASIC14.82□□□□□ -0.04
HOXC13P31276 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 GRK6P1-201ENST00000400595 1711 ntBASIC14.82□□□□□ -0.04
HOXC13P31276 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.82□□□□□ -0.04
HOXC13P31276 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
HOXC13P31276 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.82□□□□□ -0.04
HOXC13P31276 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.82□□□□□ -0.04
HOXC13P31276 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
HOXC13P31276 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC13P31276 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
HOXC13P31276 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC13P31276 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.82□□□□□ -0.04
HOXC13P31276 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC13P31276 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC13P31276 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.81□□□□□ -0.04
HOXC13P31276 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.81□□□□□ -0.04
HOXC13P31276 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC13P31276 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms