Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNA5P30532 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNA5P30532 ZNF877P-201ENST00000437614 612 ntBASIC17.36■□□□□ 0.37
CHRNA5P30532 CTBP2P6-201ENST00000526402 1229 ntBASIC17.36■□□□□ 0.37
CHRNA5P30532 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNA5P30532 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA5P30532 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA5P30532 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNA5P30532 BX322534.1-201ENST00000635574 241 ntBASIC17.36■□□□□ 0.37
CHRNA5P30532 AC215524.1-201ENST00000635696 241 ntBASIC17.36■□□□□ 0.37
CHRNA5P30532 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA5P30532 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA5P30532 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA5P30532 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CHRNA5P30532 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA5P30532 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA5P30532 DBET-201ENST00000630918 3363 ntBASIC17.36■□□□□ 0.37
CHRNA5P30532 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CHRNA5P30532 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRNA5P30532 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 AC098657.1-201ENST00000416270 1135 ntBASIC17.35■□□□□ 0.37
CHRNA5P30532 CDK4P1-201ENST00000454213 828 ntBASIC17.35■□□□□ 0.37
CHRNA5P30532 PEBP1P3-201ENST00000455475 548 ntBASIC17.35■□□□□ 0.37
CHRNA5P30532 TREX1-203ENST00000456089 629 ntTSL 3 BASIC17.35■□□□□ 0.37
CHRNA5P30532 ALG1L15P-201ENST00000482834 794 ntBASIC17.35■□□□□ 0.37
CHRNA5P30532 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.35■□□□□ 0.37
CHRNA5P30532 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC17.35■□□□□ 0.37
CHRNA5P30532 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA5P30532 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC17.35■□□□□ 0.37
CHRNA5P30532 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC17.35■□□□□ 0.37
CHRNA5P30532 AL049840.2-201ENST00000602722 535 ntBASIC17.35■□□□□ 0.37
CHRNA5P30532 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CHRNA5P30532 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHRNA5P30532 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 RPL13AP3-202ENST00000494676 1473 ntBASIC17.35■□□□□ 0.37
CHRNA5P30532 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
CHRNA5P30532 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.35■□□□□ 0.37
CHRNA5P30532 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CHRNA5P30532 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CHRNA5P30532 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA5P30532 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNA5P30532 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA5P30532 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CHRNA5P30532 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
CHRNA5P30532 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CHRNA5P30532 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CHRNA5P30532 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRNA5P30532 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNA5P30532 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA5P30532 AL354702.1-201ENST00000442006 1960 ntBASIC17.34■□□□□ 0.37
CHRNA5P30532 KRT19P4-201ENST00000443208 943 ntBASIC17.34■□□□□ 0.37
CHRNA5P30532 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRNA5P30532 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA5P30532 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA5P30532 TBC1D3P6-201ENST00000505954 962 ntBASIC17.34■□□□□ 0.37
CHRNA5P30532 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA5P30532 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA5P30532 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CHRNA5P30532 AL512310.5-201ENST00000551999 515 ntBASIC17.34■□□□□ 0.37
CHRNA5P30532 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA5P30532 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 AC016582.2-202ENST00000587765 1094 ntBASIC17.34■□□□□ 0.37
CHRNA5P30532 AC113385.2-201ENST00000614465 762 ntBASIC17.34■□□□□ 0.37
CHRNA5P30532 AC005746.3-201ENST00000614751 393 ntBASIC17.34■□□□□ 0.37
CHRNA5P30532 AC048382.6-201ENST00000621980 1223 ntBASIC17.34■□□□□ 0.37
CHRNA5P30532 AC015909.5-201ENST00000624336 2266 ntBASIC17.34■□□□□ 0.37
CHRNA5P30532 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms