Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 WASH7P-201ENST00000488147 1351 ntBASIC17.5■□□□□ 0.39
TM4SF1P30408 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.5■□□□□ 0.39
TM4SF1P30408 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TM4SF1P30408 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.5■□□□□ 0.39
TM4SF1P30408 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TM4SF1P30408 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TM4SF1P30408 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.49■□□□□ 0.39
TM4SF1P30408 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TM4SF1P30408 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TM4SF1P30408 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC17.49■□□□□ 0.39
TM4SF1P30408 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.49■□□□□ 0.39
TM4SF1P30408 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.49■□□□□ 0.39
TM4SF1P30408 AL022313.4-201ENST00000562756 2046 ntBASIC17.49■□□□□ 0.39
TM4SF1P30408 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TM4SF1P30408 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 DKKL1P1-201ENST00000400550 698 ntBASIC17.49■□□□□ 0.39
TM4SF1P30408 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC17.49■□□□□ 0.39
TM4SF1P30408 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC17.49■□□□□ 0.39
TM4SF1P30408 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC17.49■□□□□ 0.39
TM4SF1P30408 AC006116.2-201ENST00000589958 988 ntBASIC17.49■□□□□ 0.39
TM4SF1P30408 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC17.49■□□□□ 0.39
TM4SF1P30408 AL591424.3-201ENST00000614278 872 ntBASIC17.49■□□□□ 0.39
TM4SF1P30408 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.49■□□□□ 0.39
TM4SF1P30408 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.49■□□□□ 0.39
TM4SF1P30408 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 FAM226B-201ENST00000602508 1490 ntBASIC17.49■□□□□ 0.39
TM4SF1P30408 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF1P30408 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TM4SF1P30408 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TM4SF1P30408 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF1P30408 FGD5P1-202ENST00000614866 2498 ntBASIC17.48■□□□□ 0.39
TM4SF1P30408 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.48■□□□□ 0.39
TM4SF1P30408 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF1P30408 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TM4SF1P30408 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF1P30408 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF1P30408 AC138932.1-201ENST00000534164 6830 ntBASIC17.48■□□□□ 0.39
TM4SF1P30408 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TM4SF1P30408 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF1P30408 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF1P30408 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF1P30408 KRT8P30-201ENST00000432100 650 ntBASIC17.48■□□□□ 0.39
TM4SF1P30408 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC17.48■□□□□ 0.39
TM4SF1P30408 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC17.48■□□□□ 0.39
TM4SF1P30408 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC17.48■□□□□ 0.39
TM4SF1P30408 TBC1D3P6-201ENST00000505954 962 ntBASIC17.48■□□□□ 0.39
TM4SF1P30408 AC022447.6-201ENST00000515522 438 ntBASIC17.48■□□□□ 0.39
TM4SF1P30408 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC17.48■□□□□ 0.39
TM4SF1P30408 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC17.48■□□□□ 0.39
TM4SF1P30408 AC091304.3-201ENST00000566500 716 ntBASIC17.48■□□□□ 0.39
TM4SF1P30408 PRMT1P1-201ENST00000604252 1009 ntBASIC17.48■□□□□ 0.39
TM4SF1P30408 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC17.48■□□□□ 0.39
TM4SF1P30408 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC17.48■□□□□ 0.39
TM4SF1P30408 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF1P30408 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.48■□□□□ 0.39
TM4SF1P30408 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF1P30408 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TM4SF1P30408 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF1P30408 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TM4SF1P30408 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF1P30408 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF1P30408 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF1P30408 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TM4SF1P30408 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TM4SF1P30408 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC17.47■□□□□ 0.39
TM4SF1P30408 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TM4SF1P30408 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.47■□□□□ 0.39
TM4SF1P30408 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC17.47■□□□□ 0.39
TM4SF1P30408 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
TM4SF1P30408 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TM4SF1P30408 AC103563.1-201ENST00000429316 123 ntBASIC17.47■□□□□ 0.39
TM4SF1P30408 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC17.47■□□□□ 0.39
TM4SF1P30408 AC133141.1-201ENST00000443015 339 ntBASIC17.47■□□□□ 0.39
TM4SF1P30408 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC17.47■□□□□ 0.39
TM4SF1P30408 HIST1H2APS2-201ENST00000454426 370 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms