Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.72□□□□□ -0.21
PTPN6P29350 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.72□□□□□ -0.21
PTPN6P29350 FAM21FP-201ENST00000426241 1131 ntBASIC13.72□□□□□ -0.21
PTPN6P29350 YBX1P6-201ENST00000442962 1002 ntBASIC13.72□□□□□ -0.21
PTPN6P29350 CICP12-201ENST00000455801 843 ntBASIC13.72□□□□□ -0.21
PTPN6P29350 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.72□□□□□ -0.21
PTPN6P29350 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.72□□□□□ -0.21
PTPN6P29350 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.72□□□□□ -0.21
PTPN6P29350 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.72□□□□□ -0.21
PTPN6P29350 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.72□□□□□ -0.21
PTPN6P29350 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
PTPN6P29350 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 AL354989.2-201ENST00000435838 1540 ntBASIC13.72□□□□□ -0.21
PTPN6P29350 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.72□□□□□ -0.21
PTPN6P29350 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 AC027612.1-201ENST00000445234 2395 ntBASIC13.72□□□□□ -0.21
PTPN6P29350 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.71□□□□□ -0.21
PTPN6P29350 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.71□□□□□ -0.21
PTPN6P29350 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.71□□□□□ -0.21
PTPN6P29350 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PTPN6P29350 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.71□□□□□ -0.21
PTPN6P29350 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PTPN6P29350 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.71□□□□□ -0.21
PTPN6P29350 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.71□□□□□ -0.21
PTPN6P29350 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PTPN6P29350 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.71□□□□□ -0.21
PTPN6P29350 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PTPN6P29350 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PTPN6P29350 FAM8A4P-201ENST00000435433 1213 ntBASIC13.71□□□□□ -0.21
PTPN6P29350 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.71□□□□□ -0.21
PTPN6P29350 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.71□□□□□ -0.21
PTPN6P29350 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.71□□□□□ -0.21
PTPN6P29350 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.71□□□□□ -0.21
PTPN6P29350 AL583810.1-201ENST00000553344 1045 ntBASIC13.71□□□□□ -0.21
PTPN6P29350 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.71□□□□□ -0.21
PTPN6P29350 DUX4L45-201ENST00000566406 1057 ntBASIC13.71□□□□□ -0.21
PTPN6P29350 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.71□□□□□ -0.21
PTPN6P29350 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.71□□□□□ -0.21
PTPN6P29350 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 AC002472.3-201ENST00000640124 621 ntBASIC13.71□□□□□ -0.21
PTPN6P29350 AL033527.4-201ENST00000641026 673 ntBASIC13.71□□□□□ -0.21
PTPN6P29350 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PTPN6P29350 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
PTPN6P29350 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.71□□□□□ -0.21
PTPN6P29350 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.71□□□□□ -0.21
PTPN6P29350 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PTPN6P29350 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PTPN6P29350 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
PTPN6P29350 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.71□□□□□ -0.22
PTPN6P29350 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTPN6P29350 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
PTPN6P29350 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTPN6P29350 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTPN6P29350 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.71□□□□□ -0.22
PTPN6P29350 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTPN6P29350 AC087386.2-201ENST00000623212 4637 ntBASIC13.71□□□□□ -0.22
PTPN6P29350 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
PTPN6P29350 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.71□□□□□ -0.22
PTPN6P29350 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTPN6P29350 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
PTPN6P29350 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.71□□□□□ -0.22
PTPN6P29350 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTPN6P29350 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTPN6P29350 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTPN6P29350 AL928654.5-201ENST00000624831 2501 ntBASIC13.7□□□□□ -0.22
PTPN6P29350 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PTPN6P29350 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PTPN6P29350 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTPN6P29350 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTPN6P29350 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTPN6P29350 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTPN6P29350 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.7□□□□□ -0.22
PTPN6P29350 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.7□□□□□ -0.22
PTPN6P29350 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.7□□□□□ -0.22
PTPN6P29350 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms