Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.27□□□□□ -0.13
CDH3P22223 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.27□□□□□ -0.13
CDH3P22223 AC126915.1-201ENST00000522847 1038 ntBASIC14.27□□□□□ -0.13
CDH3P22223 AC131206.1-201ENST00000538078 1211 ntBASIC14.27□□□□□ -0.13
CDH3P22223 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.27□□□□□ -0.13
CDH3P22223 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.27□□□□□ -0.13
CDH3P22223 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.27□□□□□ -0.13
CDH3P22223 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.27□□□□□ -0.13
CDH3P22223 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.27□□□□□ -0.13
CDH3P22223 AC103810.3-201ENST00000583567 96 ntBASIC14.27□□□□□ -0.13
CDH3P22223 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.27□□□□□ -0.13
CDH3P22223 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
CDH3P22223 AL023803.2-201ENST00000620080 638 ntBASIC14.27□□□□□ -0.13
CDH3P22223 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.27□□□□□ -0.13
CDH3P22223 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.27□□□□□ -0.13
CDH3P22223 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CDH3P22223 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CDH3P22223 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 AC018735.1-201ENST00000437208 1502 ntBASIC14.26□□□□□ -0.13
CDH3P22223 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH3P22223 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 E2F3P2-201ENST00000447755 1422 ntBASIC14.26□□□□□ -0.13
CDH3P22223 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 KRT8P29-201ENST00000420409 1371 ntBASIC14.26□□□□□ -0.13
CDH3P22223 AL136172.1-201ENST00000598590 1394 ntBASIC14.26□□□□□ -0.13
CDH3P22223 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CDH3P22223 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.26□□□□□ -0.13
CDH3P22223 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.26□□□□□ -0.13
CDH3P22223 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.26□□□□□ -0.13
CDH3P22223 AC010141.1-201ENST00000411585 623 ntBASIC14.26□□□□□ -0.13
CDH3P22223 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 GCOM2-201ENST00000509133 1104 ntBASIC14.26□□□□□ -0.13
CDH3P22223 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.26□□□□□ -0.13
CDH3P22223 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.26□□□□□ -0.13
CDH3P22223 DUX4L46-201ENST00000566845 751 ntBASIC14.26□□□□□ -0.13
CDH3P22223 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH3P22223 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 AC008825.2-201ENST00000603374 718 ntBASIC14.26□□□□□ -0.13
CDH3P22223 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CDH3P22223 AC244452.3-201ENST00000636814 210 ntBASIC14.26□□□□□ -0.13
CDH3P22223 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CDH3P22223 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDH3P22223 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDH3P22223 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH3P22223 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDH3P22223 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH3P22223 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH3P22223 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH3P22223 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms