Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 RN7SL440P-201ENST00000577855 343 ntBASIC19.39■□□□□ 0.69
ATF3P18847 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC19.39■□□□□ 0.69
ATF3P18847 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC19.39■□□□□ 0.69
ATF3P18847 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC19.39■□□□□ 0.69
ATF3P18847 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC19.39■□□□□ 0.69
ATF3P18847 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC19.39■□□□□ 0.69
ATF3P18847 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATF3P18847 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATF3P18847 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ATF3P18847 SALL4P6-201ENST00000429385 1691 ntBASIC19.39■□□□□ 0.69
ATF3P18847 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATF3P18847 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATF3P18847 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATF3P18847 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATF3P18847 MYADML-201ENST00000474610 2147 ntBASIC19.39■□□□□ 0.69
ATF3P18847 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
ATF3P18847 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ATF3P18847 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ATF3P18847 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC19.38■□□□□ 0.69
ATF3P18847 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 U3.5-201ENST00000363448 216 ntBASIC19.38■□□□□ 0.69
ATF3P18847 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ATF3P18847 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC19.38■□□□□ 0.69
ATF3P18847 HNRNPA1P25-201ENST00000422644 937 ntBASIC19.38■□□□□ 0.69
ATF3P18847 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC19.38■□□□□ 0.69
ATF3P18847 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 RN7SL672P-201ENST00000474091 317 ntBASIC19.38■□□□□ 0.69
ATF3P18847 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ATF3P18847 AC108724.1-201ENST00000481669 352 ntBASIC19.38■□□□□ 0.69
ATF3P18847 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC19.38■□□□□ 0.69
ATF3P18847 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC19.38■□□□□ 0.69
ATF3P18847 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC19.38■□□□□ 0.69
ATF3P18847 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 AC006986.1-201ENST00000612764 241 ntBASIC19.38■□□□□ 0.69
ATF3P18847 AL162727.3-201ENST00000635661 2787 ntBASIC19.38■□□□□ 0.69
ATF3P18847 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ATF3P18847 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.38■□□□□ 0.69
ATF3P18847 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.38■□□□□ 0.69
ATF3P18847 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF3P18847 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.37■□□□□ 0.69
ATF3P18847 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ATF3P18847 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ATF3P18847 AC215219.1-201ENST00000400706 1817 ntBASIC19.37■□□□□ 0.69
ATF3P18847 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC19.37■□□□□ 0.69
ATF3P18847 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC19.37■□□□□ 0.69
ATF3P18847 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ATF3P18847 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ATF3P18847 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 AC103592.1-201ENST00000394513 664 ntBASIC19.37■□□□□ 0.69
ATF3P18847 HNRNPA1P10-201ENST00000444945 962 ntBASIC19.37■□□□□ 0.69
ATF3P18847 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 SNRPD2P2-201ENST00000473818 333 ntBASIC19.37■□□□□ 0.69
ATF3P18847 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC19.37■□□□□ 0.69
ATF3P18847 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC19.37■□□□□ 0.69
ATF3P18847 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 GRAMD4P6-201ENST00000556999 244 ntBASIC19.37■□□□□ 0.69
ATF3P18847 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC19.37■□□□□ 0.69
ATF3P18847 ACTBP9-201ENST00000587663 1099 ntBASIC19.37■□□□□ 0.69
ATF3P18847 AP001462.1-201ENST00000594089 452 ntBASIC19.37■□□□□ 0.69
ATF3P18847 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC19.37■□□□□ 0.69
ATF3P18847 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
ATF3P18847 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.37■□□□□ 0.69
ATF3P18847 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATF3P18847 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ATF3P18847 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms