Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.85□□□□□ -0.03
ERCC2P18074 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.85□□□□□ -0.03
ERCC2P18074 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ERCC2P18074 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ERCC2P18074 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ERCC2P18074 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.85□□□□□ -0.03
ERCC2P18074 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.85□□□□□ -0.03
ERCC2P18074 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.85□□□□□ -0.03
ERCC2P18074 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ERCC2P18074 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ERCC2P18074 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.84□□□□□ -0.03
ERCC2P18074 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.84□□□□□ -0.03
ERCC2P18074 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ERCC2P18074 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ERCC2P18074 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.84□□□□□ -0.03
ERCC2P18074 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ERCC2P18074 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
ERCC2P18074 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ERCC2P18074 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.84□□□□□ -0.03
ERCC2P18074 AC106794.1-201ENST00000506935 792 ntBASIC14.84□□□□□ -0.03
ERCC2P18074 AC005740.2-201ENST00000511085 419 ntBASIC14.84□□□□□ -0.03
ERCC2P18074 AC044849.1-201ENST00000519737 1188 ntBASIC14.84□□□□□ -0.03
ERCC2P18074 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.84□□□□□ -0.03
ERCC2P18074 AL136295.7-201ENST00000619226 1200 ntBASIC14.84□□□□□ -0.03
ERCC2P18074 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.84□□□□□ -0.03
ERCC2P18074 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.84□□□□□ -0.03
ERCC2P18074 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ERCC2P18074 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ERCC2P18074 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ERCC2P18074 CCT8L1P-201ENST00000465400 1674 ntBASIC14.84□□□□□ -0.03
ERCC2P18074 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.84□□□□□ -0.03
ERCC2P18074 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERCC2P18074 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
ERCC2P18074 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
ERCC2P18074 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ERCC2P18074 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.83□□□□□ -0.03
ERCC2P18074 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ERCC2P18074 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ERCC2P18074 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.83□□□□□ -0.03
ERCC2P18074 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
ERCC2P18074 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
ERCC2P18074 LINC02486-201ENST00000604157 3000 ntBASIC14.83□□□□□ -0.04
ERCC2P18074 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.83□□□□□ -0.04
ERCC2P18074 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.83□□□□□ -0.04
ERCC2P18074 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.83□□□□□ -0.04
ERCC2P18074 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
ERCC2P18074 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.83□□□□□ -0.04
ERCC2P18074 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.83□□□□□ -0.04
ERCC2P18074 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.83□□□□□ -0.04
ERCC2P18074 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 AC078875.1-201ENST00000431907 724 ntBASIC14.83□□□□□ -0.04
ERCC2P18074 NKAIN1P1-201ENST00000435754 582 ntBASIC14.83□□□□□ -0.04
ERCC2P18074 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.83□□□□□ -0.04
ERCC2P18074 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.83□□□□□ -0.04
ERCC2P18074 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
ERCC2P18074 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
ERCC2P18074 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.83□□□□□ -0.04
ERCC2P18074 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.83□□□□□ -0.04
ERCC2P18074 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.83□□□□□ -0.04
ERCC2P18074 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.83□□□□□ -0.04
ERCC2P18074 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.83□□□□□ -0.04
ERCC2P18074 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.83□□□□□ -0.04
ERCC2P18074 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.83□□□□□ -0.04
ERCC2P18074 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ERCC2P18074 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
ERCC2P18074 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.83□□□□□ -0.04
ERCC2P18074 AC005840.4-201ENST00000541242 2494 ntBASIC14.83□□□□□ -0.04
ERCC2P18074 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
ERCC2P18074 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ERCC2P18074 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms