Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.49□□□□□ -0.25
PRKCAP17252 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.49□□□□□ -0.25
PRKCAP17252 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.49□□□□□ -0.25
PRKCAP17252 ALG3P1-201ENST00000508806 1114 ntBASIC13.49□□□□□ -0.25
PRKCAP17252 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.49□□□□□ -0.25
PRKCAP17252 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.49□□□□□ -0.25
PRKCAP17252 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.49□□□□□ -0.25
PRKCAP17252 C2orf69P2-201ENST00000562032 1123 ntBASIC13.49□□□□□ -0.25
PRKCAP17252 BX088702.1-201ENST00000610784 235 ntBASIC13.49□□□□□ -0.25
PRKCAP17252 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.49□□□□□ -0.25
PRKCAP17252 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCAP17252 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.49□□□□□ -0.25
PRKCAP17252 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
PRKCAP17252 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PRKCAP17252 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCAP17252 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCAP17252 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
PRKCAP17252 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.49□□□□□ -0.25
PRKCAP17252 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.49□□□□□ -0.25
PRKCAP17252 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCAP17252 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
PRKCAP17252 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.49□□□□□ -0.25
PRKCAP17252 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCAP17252 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCAP17252 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCAP17252 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCAP17252 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCAP17252 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCAP17252 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCAP17252 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PRKCAP17252 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCAP17252 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PRKCAP17252 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.48□□□□□ -0.25
PRKCAP17252 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PRKCAP17252 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PRKCAP17252 AC106818.1-201ENST00000623223 3242 ntBASIC13.48□□□□□ -0.25
PRKCAP17252 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.48□□□□□ -0.25
PRKCAP17252 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCAP17252 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PRKCAP17252 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PRKCAP17252 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCAP17252 AC022210.1-201ENST00000449856 793 ntBASIC13.48□□□□□ -0.25
PRKCAP17252 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCAP17252 AC023310.1-201ENST00000554836 735 ntBASIC13.48□□□□□ -0.25
PRKCAP17252 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 AC079416.2-201ENST00000625035 1193 ntBASIC13.48□□□□□ -0.25
PRKCAP17252 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.48□□□□□ -0.25
PRKCAP17252 AC008687.7-202ENST00000637404 953 ntBASIC13.48□□□□□ -0.25
PRKCAP17252 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
PRKCAP17252 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PRKCAP17252 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.48□□□□□ -0.25
PRKCAP17252 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PRKCAP17252 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCAP17252 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
PRKCAP17252 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCAP17252 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCAP17252 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PRKCAP17252 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCAP17252 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.47□□□□□ -0.25
PRKCAP17252 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
PRKCAP17252 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
PRKCAP17252 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PRKCAP17252 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.47□□□□□ -0.25
PRKCAP17252 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.47□□□□□ -0.25
PRKCAP17252 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
PRKCAP17252 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCAP17252 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms