Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL4P13236 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCL4P13236 BX679664.3-201ENST00000414070 555 ntBASIC13.49□□□□□ -0.25
CCL4P13236 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC13.49□□□□□ -0.25
CCL4P13236 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL4P13236 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC13.49□□□□□ -0.25
CCL4P13236 AC113935.1-201ENST00000471722 555 ntBASIC13.49□□□□□ -0.25
CCL4P13236 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL4P13236 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL4P13236 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.49□□□□□ -0.25
CCL4P13236 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.49□□□□□ -0.25
CCL4P13236 AC005357.2-202ENST00000590507 1060 ntBASIC13.49□□□□□ -0.25
CCL4P13236 FO393412.1-201ENST00000619841 382 ntBASIC13.49□□□□□ -0.25
CCL4P13236 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.49□□□□□ -0.25
CCL4P13236 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CCL4P13236 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CCL4P13236 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CCL4P13236 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.49□□□□□ -0.25
CCL4P13236 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CCL4P13236 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CCL4P13236 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCL4P13236 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.49□□□□□ -0.25
CCL4P13236 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.49□□□□□ -0.25
CCL4P13236 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL4P13236 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL4P13236 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CCL4P13236 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL4P13236 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL4P13236 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL4P13236 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
CCL4P13236 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL4P13236 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL4P13236 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CCL4P13236 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 RNVU1-8-201ENST00000364272 125 ntBASIC13.48□□□□□ -0.25
CCL4P13236 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CCL4P13236 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 AC108734.2-201ENST00000420887 1069 ntBASIC13.48□□□□□ -0.25
CCL4P13236 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CCL4P13236 PPP1R2P4-201ENST00000424051 595 ntBASIC13.48□□□□□ -0.25
CCL4P13236 BCAS2P2-201ENST00000425064 674 ntBASIC13.48□□□□□ -0.25
CCL4P13236 GRPEL2P1-201ENST00000453145 339 ntBASIC13.48□□□□□ -0.25
CCL4P13236 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CCL4P13236 AC024293.1-201ENST00000467930 498 ntBASIC13.48□□□□□ -0.25
CCL4P13236 AC010234.1-201ENST00000494599 870 ntBASIC13.48□□□□□ -0.25
CCL4P13236 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.48□□□□□ -0.25
CCL4P13236 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.48□□□□□ -0.25
CCL4P13236 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL4P13236 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL4P13236 KRT8P2-201ENST00000556193 944 ntBASIC13.48□□□□□ -0.25
CCL4P13236 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.48□□□□□ -0.25
CCL4P13236 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC13.48□□□□□ -0.25
CCL4P13236 MIR6074-201ENST00000612054 107 ntBASIC13.48□□□□□ -0.25
CCL4P13236 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL4P13236 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL4P13236 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
CCL4P13236 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 INTS4P1-203ENST00000641008 3683 ntBASIC13.48□□□□□ -0.25
CCL4P13236 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CCL4P13236 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CCL4P13236 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL4P13236 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL4P13236 KRT8P18-201ENST00000413425 1445 ntBASIC13.47□□□□□ -0.25
CCL4P13236 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CCL4P13236 MYO15B-237ENST00000642007 4893 ntBASIC13.47□□□□□ -0.25
CCL4P13236 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms