Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.3□□□□□ -0.12
COL6A2P12110 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COL6A2P12110 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.3□□□□□ -0.12
COL6A2P12110 AC015936.2-201ENST00000593177 259 ntBASIC14.3□□□□□ -0.12
COL6A2P12110 AC073413.1-201ENST00000603927 732 ntBASIC14.3□□□□□ -0.12
COL6A2P12110 ZACNP1-201ENST00000612259 710 ntBASIC14.3□□□□□ -0.12
COL6A2P12110 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.3□□□□□ -0.12
COL6A2P12110 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.3□□□□□ -0.12
COL6A2P12110 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.3□□□□□ -0.12
COL6A2P12110 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.3□□□□□ -0.12
COL6A2P12110 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.3□□□□□ -0.12
COL6A2P12110 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.3□□□□□ -0.12
COL6A2P12110 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.3□□□□□ -0.12
COL6A2P12110 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.3□□□□□ -0.12
COL6A2P12110 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 AC083964.2-201ENST00000623988 2396 ntBASIC14.3□□□□□ -0.12
COL6A2P12110 AC020658.7-201ENST00000624274 2442 ntBASIC14.3□□□□□ -0.12
COL6A2P12110 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL6A2P12110 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
COL6A2P12110 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.29□□□□□ -0.12
COL6A2P12110 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.29□□□□□ -0.12
COL6A2P12110 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 AL391647.1-201ENST00000395664 511 ntBASIC14.29□□□□□ -0.12
COL6A2P12110 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
COL6A2P12110 AL590640.2-201ENST00000457038 527 ntBASIC14.29□□□□□ -0.12
COL6A2P12110 KRT18P15-201ENST00000458108 1291 ntBASIC14.29□□□□□ -0.12
COL6A2P12110 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.29□□□□□ -0.12
COL6A2P12110 TERF1P3-201ENST00000505638 1227 ntBASIC14.29□□□□□ -0.12
COL6A2P12110 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.29□□□□□ -0.12
COL6A2P12110 SLC25A47P1-201ENST00000531577 414 ntBASIC14.29□□□□□ -0.12
COL6A2P12110 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.29□□□□□ -0.12
COL6A2P12110 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.29□□□□□ -0.12
COL6A2P12110 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.29□□□□□ -0.12
COL6A2P12110 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
COL6A2P12110 PDIA3P1-201ENST00000471856 1510 ntBASIC14.29□□□□□ -0.12
COL6A2P12110 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
COL6A2P12110 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
COL6A2P12110 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
COL6A2P12110 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
COL6A2P12110 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL6A2P12110 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL6A2P12110 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL6A2P12110 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL6A2P12110 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL6A2P12110 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms