Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 YBX1P6-201ENST00000442962 1002 ntBASIC14.53□□□□□ -0.08
APOA4P06727 KRT223P-202ENST00000449164 1292 ntBASIC14.53□□□□□ -0.08
APOA4P06727 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.53□□□□□ -0.08
APOA4P06727 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.53□□□□□ -0.08
APOA4P06727 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.53□□□□□ -0.08
APOA4P06727 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.53□□□□□ -0.08
APOA4P06727 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 AC008825.2-201ENST00000603374 718 ntBASIC14.53□□□□□ -0.08
APOA4P06727 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.53□□□□□ -0.08
APOA4P06727 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
APOA4P06727 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
APOA4P06727 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.53□□□□□ -0.08
APOA4P06727 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA4P06727 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.53□□□□□ -0.08
APOA4P06727 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.52□□□□□ -0.08
APOA4P06727 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOA4P06727 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
APOA4P06727 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
APOA4P06727 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.52□□□□□ -0.08
APOA4P06727 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.52□□□□□ -0.08
APOA4P06727 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOA4P06727 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOA4P06727 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
APOA4P06727 CICP17-201ENST00000418553 2377 ntBASIC14.52□□□□□ -0.08
APOA4P06727 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.52□□□□□ -0.08
APOA4P06727 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOA4P06727 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOA4P06727 OR8S1-201ENST00000310194 1080 ntBASIC14.52□□□□□ -0.09
APOA4P06727 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
APOA4P06727 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOA4P06727 MIR658-201ENST00000385210 100 ntBASIC14.52□□□□□ -0.09
APOA4P06727 HLA-V-201ENST00000429037 534 ntBASIC14.52□□□□□ -0.09
APOA4P06727 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.52□□□□□ -0.09
APOA4P06727 CSF2RBP1-201ENST00000447905 391 ntBASIC14.52□□□□□ -0.09
APOA4P06727 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.52□□□□□ -0.09
APOA4P06727 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.52□□□□□ -0.09
APOA4P06727 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.52□□□□□ -0.09
APOA4P06727 AP006547.1-201ENST00000563435 692 ntBASIC14.52□□□□□ -0.09
APOA4P06727 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.52□□□□□ -0.09
APOA4P06727 AL136301.1-201ENST00000615830 422 ntBASIC14.52□□□□□ -0.09
APOA4P06727 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
APOA4P06727 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.52□□□□□ -0.09
APOA4P06727 COX11-210ENST00000639671 696 ntBASIC14.52□□□□□ -0.09
APOA4P06727 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
APOA4P06727 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
APOA4P06727 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
APOA4P06727 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
APOA4P06727 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOA4P06727 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOA4P06727 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
APOA4P06727 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOA4P06727 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOA4P06727 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
APOA4P06727 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOA4P06727 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.52□□□□□ -0.09
APOA4P06727 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOA4P06727 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
APOA4P06727 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.52□□□□□ -0.09
APOA4P06727 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
APOA4P06727 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.51□□□□□ -0.09
APOA4P06727 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 PTENP1-202ENST00000532280 3996 ntBASIC14.51□□□□□ -0.09
APOA4P06727 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
APOA4P06727 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
APOA4P06727 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 AC064801.2-201ENST00000625052 1303 ntBASIC14.51□□□□□ -0.09
APOA4P06727 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 AC092053.3-201ENST00000641308 4975 ntBASIC14.51□□□□□ -0.09
APOA4P06727 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
APOA4P06727 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.51□□□□□ -0.09
APOA4P06727 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms