Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DOAP06340 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DOAP06340 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DOAP06340 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DOAP06340 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DOAP06340 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
HLA-DOAP06340 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DOAP06340 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DOAP06340 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DOAP06340 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 HIST2H2BA-201ENST00000412169 381 ntBASIC16.9■□□□□ 0.3
HLA-DOAP06340 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 NDUFB10P1-201ENST00000567319 521 ntBASIC16.9■□□□□ 0.3
HLA-DOAP06340 MIR3180-2-201ENST00000581748 88 ntBASIC16.9■□□□□ 0.3
HLA-DOAP06340 MIR4649-201ENST00000582839 64 ntBASIC16.9■□□□□ 0.3
HLA-DOAP06340 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 AP000322.3-201ENST00000608665 388 ntBASIC16.9■□□□□ 0.3
HLA-DOAP06340 AC107464.3-201ENST00000609172 737 ntBASIC16.9■□□□□ 0.3
HLA-DOAP06340 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.9■□□□□ 0.3
HLA-DOAP06340 AC005618.3-201ENST00000624928 458 ntBASIC16.9■□□□□ 0.3
HLA-DOAP06340 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 LINC00115-201ENST00000473798 1317 ntBASIC16.9■□□□□ 0.3
HLA-DOAP06340 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DOAP06340 AC006372.4-201ENST00000624122 1543 ntBASIC16.9■□□□□ 0.3
HLA-DOAP06340 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOAP06340 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.89■□□□□ 0.3
HLA-DOAP06340 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
HLA-DOAP06340 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DOAP06340 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DOAP06340 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 AC090505.1-201ENST00000430515 1834 ntBASIC16.89■□□□□ 0.29
HLA-DOAP06340 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOAP06340 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOAP06340 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 GUSBP10-201ENST00000417412 665 ntBASIC16.89■□□□□ 0.29
HLA-DOAP06340 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOAP06340 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 AL512310.5-201ENST00000551999 515 ntBASIC16.89■□□□□ 0.29
HLA-DOAP06340 HERC2P11-201ENST00000562845 725 ntBASIC16.89■□□□□ 0.29
HLA-DOAP06340 AC100756.2-201ENST00000569537 736 ntBASIC16.89■□□□□ 0.29
HLA-DOAP06340 AL021707.6-201ENST00000609212 491 ntBASIC16.89■□□□□ 0.29
HLA-DOAP06340 AC009145.4-201ENST00000625119 1294 ntBASIC16.89■□□□□ 0.29
HLA-DOAP06340 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOAP06340 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOAP06340 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOAP06340 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DOAP06340 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOAP06340 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOAP06340 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HLA-DOAP06340 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DOAP06340 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DOAP06340 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DOAP06340 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DOAP06340 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DOAP06340 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DOAP06340 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DOAP06340 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HLA-DOAP06340 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DOAP06340 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms