Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC18.38■□□□□ 0.53
COL5A2P05997 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.38■□□□□ 0.53
COL5A2P05997 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
COL5A2P05997 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.38■□□□□ 0.53
COL5A2P05997 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.38■□□□□ 0.53
COL5A2P05997 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC18.38■□□□□ 0.53
COL5A2P05997 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC18.38■□□□□ 0.53
COL5A2P05997 SNX15-201ENST00000352068 771 ntTSL 5 BASIC18.38■□□□□ 0.53
COL5A2P05997 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC18.38■□□□□ 0.53
COL5A2P05997 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC18.38■□□□□ 0.53
COL5A2P05997 OR7E155P-201ENST00000412208 1014 ntBASIC18.38■□□□□ 0.53
COL5A2P05997 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC18.38■□□□□ 0.53
COL5A2P05997 AC011431.1-201ENST00000512971 230 ntBASIC18.38■□□□□ 0.53
COL5A2P05997 AC132812.1-201ENST00000583145 892 ntBASIC18.38■□□□□ 0.53
COL5A2P05997 AC123912.6-201ENST00000612657 315 ntBASIC18.38■□□□□ 0.53
COL5A2P05997 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 AC008620.2-201ENST00000510294 1569 ntBASIC18.38■□□□□ 0.53
COL5A2P05997 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL5A2P05997 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
COL5A2P05997 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL5A2P05997 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COL5A2P05997 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL5A2P05997 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL5A2P05997 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL5A2P05997 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL5A2P05997 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL5A2P05997 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
COL5A2P05997 SNU13-204ENST00000402458 462 ntTSL 3 BASIC18.37■□□□□ 0.53
COL5A2P05997 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL5A2P05997 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC18.37■□□□□ 0.53
COL5A2P05997 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.37■□□□□ 0.53
COL5A2P05997 RPL29P2-201ENST00000488409 460 ntBASIC18.37■□□□□ 0.53
COL5A2P05997 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL5A2P05997 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COL5A2P05997 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC18.37■□□□□ 0.53
COL5A2P05997 LY6E-215ENST00000523847 427 ntTSL 3 BASIC18.37■□□□□ 0.53
COL5A2P05997 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
COL5A2P05997 GRAMD4P6-201ENST00000556999 244 ntBASIC18.37■□□□□ 0.53
COL5A2P05997 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC18.37■□□□□ 0.53
COL5A2P05997 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC18.37■□□□□ 0.53
COL5A2P05997 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL5A2P05997 AC105917.1-201ENST00000506637 2539 ntBASIC18.37■□□□□ 0.53
COL5A2P05997 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC18.37■□□□□ 0.53
COL5A2P05997 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COL5A2P05997 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC18.37■□□□□ 0.53
COL5A2P05997 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
COL5A2P05997 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL5A2P05997 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.37■□□□□ 0.53
COL5A2P05997 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL5A2P05997 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC18.36■□□□□ 0.53
COL5A2P05997 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC18.36■□□□□ 0.53
COL5A2P05997 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL5A2P05997 AC023157.3-201ENST00000619086 2088 ntBASIC18.36■□□□□ 0.53
COL5A2P05997 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
COL5A2P05997 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC18.36■□□□□ 0.53
COL5A2P05997 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC18.36■□□□□ 0.53
COL5A2P05997 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC18.36■□□□□ 0.53
COL5A2P05997 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC18.36■□□□□ 0.53
COL5A2P05997 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC18.36■□□□□ 0.53
COL5A2P05997 KRT18P44-201ENST00000416086 1285 ntBASIC18.36■□□□□ 0.53
COL5A2P05997 RPSAP6-201ENST00000417882 882 ntBASIC18.36■□□□□ 0.53
COL5A2P05997 KRT19P4-201ENST00000443208 943 ntBASIC18.36■□□□□ 0.53
COL5A2P05997 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC18.36■□□□□ 0.53
COL5A2P05997 AC099328.1-201ENST00000498809 1030 ntBASIC18.36■□□□□ 0.53
COL5A2P05997 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
COL5A2P05997 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC18.36■□□□□ 0.53
COL5A2P05997 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC18.36■□□□□ 0.53
COL5A2P05997 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
COL5A2P05997 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL5A2P05997 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL5A2P05997 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms