Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.47□□□□□ -0.57
IFNA1P01562 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
IFNA1P01562 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
IFNA1P01562 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.46□□□□□ -0.57
IFNA1P01562 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.46□□□□□ -0.57
IFNA1P01562 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 GOLGA8CP-201ENST00000446144 5237 ntBASIC11.46□□□□□ -0.57
IFNA1P01562 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.46□□□□□ -0.57
IFNA1P01562 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 AL031719.1-201ENST00000623365 2587 ntBASIC11.46□□□□□ -0.57
IFNA1P01562 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
IFNA1P01562 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.46□□□□□ -0.57
IFNA1P01562 AGAP12P-201ENST00000585227 2359 ntBASIC11.46□□□□□ -0.57
IFNA1P01562 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.46□□□□□ -0.57
IFNA1P01562 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
IFNA1P01562 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
IFNA1P01562 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
IFNA1P01562 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.46□□□□□ -0.57
IFNA1P01562 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.46□□□□□ -0.57
IFNA1P01562 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
IFNA1P01562 PDPK2P-202ENST00000562415 1191 ntBASIC11.46□□□□□ -0.57
IFNA1P01562 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.46□□□□□ -0.57
IFNA1P01562 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.46□□□□□ -0.57
IFNA1P01562 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.46□□□□□ -0.57
IFNA1P01562 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.46□□□□□ -0.57
IFNA1P01562 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.46□□□□□ -0.57
IFNA1P01562 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.46□□□□□ -0.57
IFNA1P01562 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.46□□□□□ -0.57
IFNA1P01562 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.46□□□□□ -0.57
IFNA1P01562 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
IFNA1P01562 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
IFNA1P01562 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
IFNA1P01562 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
IFNA1P01562 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
IFNA1P01562 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
IFNA1P01562 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
IFNA1P01562 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.46□□□□□ -0.58
IFNA1P01562 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
IFNA1P01562 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
IFNA1P01562 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
IFNA1P01562 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
IFNA1P01562 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.46□□□□□ -0.58
IFNA1P01562 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
IFNA1P01562 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.46□□□□□ -0.58
IFNA1P01562 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.46□□□□□ -0.58
IFNA1P01562 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 AGGF1P10-201ENST00000635005 2191 ntBASIC11.45□□□□□ -0.58
IFNA1P01562 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
IFNA1P01562 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
IFNA1P01562 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.45□□□□□ -0.58
IFNA1P01562 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.45□□□□□ -0.58
IFNA1P01562 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
IFNA1P01562 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
IFNA1P01562 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 DDC-214ENST00000622873 1839 ntTSL 3 BASIC11.45□□□□□ -0.58
IFNA1P01562 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.45□□□□□ -0.58
IFNA1P01562 CSPG4P12-201ENST00000558282 4853 ntBASIC11.45□□□□□ -0.58
IFNA1P01562 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
IFNA1P01562 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.45□□□□□ -0.58
IFNA1P01562 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.45□□□□□ -0.58
IFNA1P01562 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
IFNA1P01562 TOMM22P5-201ENST00000416399 439 ntBASIC11.45□□□□□ -0.58
IFNA1P01562 SPDYE11-202ENST00000450699 704 ntBASIC11.45□□□□□ -0.58
IFNA1P01562 SERBP1P3-201ENST00000459980 809 ntBASIC11.45□□□□□ -0.58
IFNA1P01562 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
IFNA1P01562 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.45□□□□□ -0.58
IFNA1P01562 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.45□□□□□ -0.58
IFNA1P01562 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.45□□□□□ -0.58
IFNA1P01562 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.45□□□□□ -0.58
IFNA1P01562 SORD2P-201ENST00000558556 1069 ntBASIC11.45□□□□□ -0.58
IFNA1P01562 AC018845.2-201ENST00000568326 409 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms