Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 CCL25-202ENST00000315626 450 ntTSL 2 BASIC20.35■□□□□ 0.85
POLR1AO95602 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 MIR611-201ENST00000384869 67 ntBASIC20.35■□□□□ 0.85
POLR1AO95602 BAX-205ENST00000391871 687 ntTSL 5 BASIC20.35■□□□□ 0.85
POLR1AO95602 MAGEA7P-201ENST00000436482 942 ntBASIC20.35■□□□□ 0.85
POLR1AO95602 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 TREX1-203ENST00000456089 629 ntTSL 3 BASIC20.35■□□□□ 0.85
POLR1AO95602 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
POLR1AO95602 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC20.35■□□□□ 0.85
POLR1AO95602 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC20.35■□□□□ 0.85
POLR1AO95602 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC20.35■□□□□ 0.85
POLR1AO95602 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
POLR1AO95602 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1AO95602 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1AO95602 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1AO95602 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC20.34■□□□□ 0.85
POLR1AO95602 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1AO95602 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1AO95602 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1AO95602 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1AO95602 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1AO95602 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
POLR1AO95602 RHOC-205ENST00000369636 786 ntTSL 2 BASIC20.34■□□□□ 0.85
POLR1AO95602 USP17L6P-201ENST00000382470 1197 ntBASIC20.34■□□□□ 0.85
POLR1AO95602 DKKL1P1-201ENST00000400550 698 ntBASIC20.34■□□□□ 0.85
POLR1AO95602 VENTXP4-201ENST00000449029 958 ntBASIC20.34■□□□□ 0.85
POLR1AO95602 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC20.34■□□□□ 0.85
POLR1AO95602 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC20.34■□□□□ 0.85
POLR1AO95602 AC104506.1-201ENST00000609247 429 ntBASIC20.34■□□□□ 0.85
POLR1AO95602 AC006986.1-201ENST00000612764 241 ntBASIC20.34■□□□□ 0.85
POLR1AO95602 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC20.34■□□□□ 0.85
POLR1AO95602 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
POLR1AO95602 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC20.34■□□□□ 0.85
POLR1AO95602 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
POLR1AO95602 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
POLR1AO95602 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
POLR1AO95602 LAP3P2-201ENST00000454686 1454 ntBASIC20.34■□□□□ 0.85
POLR1AO95602 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1AO95602 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1AO95602 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1AO95602 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
POLR1AO95602 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
POLR1AO95602 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC20.33■□□□□ 0.85
POLR1AO95602 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR1AO95602 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR1AO95602 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC20.33■□□□□ 0.85
POLR1AO95602 LINP1-201ENST00000417112 917 ntTSL 2 BASIC20.33■□□□□ 0.85
POLR1AO95602 EEF1DP2-201ENST00000433698 843 ntBASIC20.33■□□□□ 0.85
POLR1AO95602 CDK4P1-201ENST00000454213 828 ntBASIC20.33■□□□□ 0.85
POLR1AO95602 AC005740.1-201ENST00000515639 522 ntBASIC20.33■□□□□ 0.85
POLR1AO95602 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC20.33■□□□□ 0.85
POLR1AO95602 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC20.33■□□□□ 0.85
POLR1AO95602 AC091769.1-201ENST00000619576 568 ntBASIC20.33■□□□□ 0.85
POLR1AO95602 AC139713.2-207ENST00000641556 1292 ntBASIC20.33■□□□□ 0.85
POLR1AO95602 OS9-204ENST00000389146 2091 ntTSL 2 BASIC20.33■□□□□ 0.85
POLR1AO95602 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
POLR1AO95602 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC20.33■□□□□ 0.85
POLR1AO95602 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR1AO95602 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC20.33■□□□□ 0.85
POLR1AO95602 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC20.33■□□□□ 0.85
POLR1AO95602 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR1AO95602 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
POLR1AO95602 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC20.33■□□□□ 0.85
POLR1AO95602 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR1AO95602 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC20.33■□□□□ 0.84
POLR1AO95602 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
POLR1AO95602 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
POLR1AO95602 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
POLR1AO95602 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
POLR1AO95602 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
POLR1AO95602 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
POLR1AO95602 OR7E115P-201ENST00000382617 1024 ntBASIC20.33■□□□□ 0.84
POLR1AO95602 ABCD1P4-201ENST00000399687 604 ntBASIC20.33■□□□□ 0.84
POLR1AO95602 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
POLR1AO95602 GALP-202ENST00000440823 889 ntTSL 5 BASIC20.33■□□□□ 0.84
POLR1AO95602 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC20.33■□□□□ 0.84
POLR1AO95602 RN7SKP155-201ENST00000516031 288 ntBASIC20.33■□□□□ 0.84
POLR1AO95602 HNRNPA1P5-201ENST00000558213 966 ntBASIC20.33■□□□□ 0.84
POLR1AO95602 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
POLR1AO95602 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC20.33■□□□□ 0.84
POLR1AO95602 SKA2-205ENST00000580541 689 ntTSL 3 BASIC20.33■□□□□ 0.84
POLR1AO95602 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
POLR1AO95602 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC20.33■□□□□ 0.84
POLR1AO95602 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
POLR1AO95602 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
POLR1AO95602 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1AO95602 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1AO95602 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC20.32■□□□□ 0.84
POLR1AO95602 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
POLR1AO95602 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1AO95602 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1AO95602 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 226.7 ms