Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.72■□□□□ 0.43
CACNA1FO60840 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1FO60840 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.72■□□□□ 0.43
CACNA1FO60840 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.72■□□□□ 0.43
CACNA1FO60840 RN7SL190P-201ENST00000582519 257 ntBASIC17.72■□□□□ 0.43
CACNA1FO60840 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1FO60840 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1FO60840 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CACNA1FO60840 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CACNA1FO60840 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1FO60840 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CACNA1FO60840 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 IL9RP3-201ENST00000442856 1674 ntBASIC17.72■□□□□ 0.43
CACNA1FO60840 AL513477.1-201ENST00000602865 2407 ntBASIC17.71■□□□□ 0.43
CACNA1FO60840 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA1FO60840 AC087045.2-201ENST00000606279 1003 ntBASIC17.71■□□□□ 0.43
CACNA1FO60840 AL031673.1-201ENST00000611460 466 ntBASIC17.71■□□□□ 0.43
CACNA1FO60840 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.71■□□□□ 0.43
CACNA1FO60840 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA1FO60840 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA1FO60840 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA1FO60840 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA1FO60840 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CACNA1FO60840 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CACNA1FO60840 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA1FO60840 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC17.71■□□□□ 0.43
CACNA1FO60840 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA1FO60840 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA1FO60840 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA1FO60840 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA1FO60840 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CACNA1FO60840 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CACNA1FO60840 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA1FO60840 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
CACNA1FO60840 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA1FO60840 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA1FO60840 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA1FO60840 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.71■□□□□ 0.43
CACNA1FO60840 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA1FO60840 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA1FO60840 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CACNA1FO60840 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA1FO60840 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CACNA1FO60840 FAM90A12P-201ENST00000519497 2375 ntBASIC17.71■□□□□ 0.43
CACNA1FO60840 FAM90A24P-201ENST00000520792 2369 ntBASIC17.71■□□□□ 0.43
CACNA1FO60840 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.71■□□□□ 0.42
CACNA1FO60840 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC17.71■□□□□ 0.42
CACNA1FO60840 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CACNA1FO60840 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.7■□□□□ 0.42
CACNA1FO60840 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.7■□□□□ 0.42
CACNA1FO60840 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.7■□□□□ 0.42
CACNA1FO60840 AL592076.1-201ENST00000424448 303 ntBASIC17.7■□□□□ 0.42
CACNA1FO60840 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC17.7■□□□□ 0.42
CACNA1FO60840 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CACNA1FO60840 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.7■□□□□ 0.42
CACNA1FO60840 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.7■□□□□ 0.42
CACNA1FO60840 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 AC068867.1-201ENST00000559855 150 ntBASIC17.7■□□□□ 0.42
CACNA1FO60840 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.7■□□□□ 0.42
CACNA1FO60840 MIR4722-201ENST00000578292 60 ntBASIC17.7■□□□□ 0.42
CACNA1FO60840 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CACNA1FO60840 AL359091.4-201ENST00000610052 409 ntBASIC17.7■□□□□ 0.42
CACNA1FO60840 AC026120.2-201ENST00000617239 309 ntBASIC17.7■□□□□ 0.42
CACNA1FO60840 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
CACNA1FO60840 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC17.7■□□□□ 0.42
CACNA1FO60840 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CACNA1FO60840 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.7■□□□□ 0.42
CACNA1FO60840 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CACNA1FO60840 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CACNA1FO60840 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC17.7■□□□□ 0.42
CACNA1FO60840 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC17.7■□□□□ 0.42
CACNA1FO60840 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 AC106827.1-201ENST00000366454 431 ntBASIC17.7■□□□□ 0.42
CACNA1FO60840 ACTBP14-201ENST00000411655 1089 ntBASIC17.7■□□□□ 0.42
CACNA1FO60840 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms