Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 AC023824.1-201ENST00000562945 2975 ntBASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 AC073869.2-201ENST00000417338 1026 ntBASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 RPL17P11-201ENST00000417593 544 ntBASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 FTH1P22-201ENST00000456305 520 ntBASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 ALG1L13P-202ENST00000519320 584 ntBASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 AC009560.1-201ENST00000620208 434 ntBASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 AC092978.1-202ENST00000637590 1327 ntBASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TBC1D3FA6NER0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 Z69890.1-201ENST00000382990 339 ntBASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 AC104784.1-201ENST00000473096 294 ntBASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TBC1D3FA6NER0 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms