Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 AP001889.1-201ENST00000525414 633 ntBASIC15.37■□□□□ 0.05
RCCD1A6NED2 TDH-203ENST00000531764 1110 ntBASIC15.37■□□□□ 0.05
RCCD1A6NED2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 RN7SL204P-201ENST00000582831 262 ntBASIC15.37■□□□□ 0.05
RCCD1A6NED2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 AC073413.1-201ENST00000603927 732 ntBASIC15.37■□□□□ 0.05
RCCD1A6NED2 AC009118.3-201ENST00000622896 873 ntBASIC15.37■□□□□ 0.05
RCCD1A6NED2 AC027601.3-201ENST00000622907 509 ntBASIC15.37■□□□□ 0.05
RCCD1A6NED2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 PCDHB18P-202ENST00000526308 3197 ntBASIC15.37■□□□□ 0.05
RCCD1A6NED2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCCD1A6NED2 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RCCD1A6NED2 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 PTP4A1P2-201ENST00000546033 454 ntBASIC15.36■□□□□ 0.05
RCCD1A6NED2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 AC010319.3-201ENST00000597028 470 ntBASIC15.36■□□□□ 0.05
RCCD1A6NED2 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 AL391262.2-201ENST00000622466 494 ntBASIC15.36■□□□□ 0.05
RCCD1A6NED2 AC132938.4-201ENST00000623835 848 ntBASIC15.36■□□□□ 0.05
RCCD1A6NED2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RCCD1A6NED2 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCCD1A6NED2 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms