Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 AC027237.1-201ENST00000560942 655 ntBASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 AC027601.3-201ENST00000622907 509 ntBASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 AC009093.10-201ENST00000641956 1442 ntBASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 AC090643.2-201ENST00000623442 2029 ntBASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF11Q9Y3C5 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 AL136309.1-201ENST00000403917 691 ntBASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 CROCCP4-201ENST00000457096 498 ntBASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.13□□□□□ -0.15
RNF11Q9Y3C5 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms