Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 AC002472.3-201ENST00000640124 621 ntBASIC13□□□□□ -0.33
POLR1DQ9Y2S0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 AC010336.1-201ENST00000539278 4739 ntBASIC13□□□□□ -0.33
POLR1DQ9Y2S0 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13□□□□□ -0.33
POLR1DQ9Y2S0 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 CU639417.3-201ENST00000624240 1404 ntBASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 FTH1P14-201ENST00000482930 551 ntBASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 USP32P1-208ENST00000506594 1164 ntBASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 AC132938.2-201ENST00000579188 680 ntBASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 GNRHR2-203ENST00000581100 1187 ntBASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 AL591163.1-201ENST00000641757 987 ntBASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 AC009093.2-202ENST00000620513 2079 ntBASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 AC011498.7-201ENST00000624986 2027 ntBASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
POLR1DQ9Y2S0 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms