Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MBP-238ENST00000580402 915 ntTSL 5 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 GOLGA8EP-201ENST00000530246 1959 ntBASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 AK2P2-201ENST00000439142 405 ntBASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 AC092903.1-201ENST00000466506 262 ntBASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 HNRNPA1P5-201ENST00000558213 966 ntBASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 FAM187B2P-201ENST00000577135 713 ntBASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 AC008620.2-201ENST00000510294 1569 ntBASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 AC016397.2-201ENST00000624848 1985 ntBASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 OR10N1P-201ENST00000392758 869 ntBASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 NME6-208ENST00000435684 599 ntTSL 2 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 RN7SL351P-201ENST00000469306 248 ntBASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 AC132812.1-201ENST00000583145 892 ntBASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHANK2Q9UPX8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 HLA-DPA2-205ENST00000433582 733 ntBASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 EMC4-208ENST00000559078 599 ntTSL 3 BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 AC023968.2-201ENST00000560593 1049 ntBASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 AC090643.2-201ENST00000623442 2029 ntBASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHANK2Q9UPX8 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms