Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 OLA1P2-201ENST00000395519 1264 ntBASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 ABCD1P4-201ENST00000399687 604 ntBASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 AC073210.1-201ENST00000414799 232 ntBASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 AC092573.1-201ENST00000433054 884 ntBASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 AL356000.1-201ENST00000441073 1238 ntBASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 RN7SKP155-201ENST00000516031 288 ntBASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 LY6E-215ENST00000523847 427 ntTSL 3 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 MIR4265-201ENST00000582152 99 ntBASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 PRMT1P1-201ENST00000604252 1009 ntBASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 MIR6125-201ENST00000618986 96 ntBASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 AC079414.2-201ENST00000567157 1104 ntBASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 AC006116.2-201ENST00000589958 988 ntBASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 ESR1-214ENST00000638569 132 ntTSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
ZC3H4Q9UPT8 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 AL121949.3-201ENST00000406684 385 ntBASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 STK24P1-201ENST00000455035 1291 ntBASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 AC092903.1-201ENST00000466506 262 ntBASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms