Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 AL590235.1-201ENST00000564650 861 ntBASIC19.27■□□□□ 0.68
PHF8Q9UPP1 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC19.27■□□□□ 0.68
PHF8Q9UPP1 MIR6816-201ENST00000620368 66 ntBASIC19.27■□□□□ 0.68
PHF8Q9UPP1 AC026336.4-201ENST00000624565 1050 ntBASIC19.27■□□□□ 0.68
PHF8Q9UPP1 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHF8Q9UPP1 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PHF8Q9UPP1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
PHF8Q9UPP1 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
PHF8Q9UPP1 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PHF8Q9UPP1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC19.27■□□□□ 0.67
PHF8Q9UPP1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PHF8Q9UPP1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.27■□□□□ 0.67
PHF8Q9UPP1 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PHF8Q9UPP1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 DUT-208ENST00000559540 1441 ntTSL 2 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 ALG1L7P-201ENST00000502317 768 ntBASIC19.26■□□□□ 0.67
PHF8Q9UPP1 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 URAHP-205ENST00000610227 398 ntBASIC19.26■□□□□ 0.67
PHF8Q9UPP1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF8Q9UPP1 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 ACTBP14-201ENST00000411655 1089 ntBASIC19.25■□□□□ 0.67
PHF8Q9UPP1 IFNWP2-201ENST00000431203 580 ntBASIC19.25■□□□□ 0.67
PHF8Q9UPP1 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 KRT18P15-201ENST00000458108 1291 ntBASIC19.25■□□□□ 0.67
PHF8Q9UPP1 RN7SL351P-201ENST00000469306 248 ntBASIC19.25■□□□□ 0.67
PHF8Q9UPP1 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 AC092612.1-201ENST00000514501 998 ntBASIC19.25■□□□□ 0.67
PHF8Q9UPP1 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 AL359219.1-201ENST00000556311 934 ntBASIC19.25■□□□□ 0.67
PHF8Q9UPP1 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC19.25■□□□□ 0.67
PHF8Q9UPP1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 AC013268.4-201ENST00000637413 2228 ntBASIC19.25■□□□□ 0.67
PHF8Q9UPP1 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms