Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 AC041040.2-201ENST00000622926 2899 ntBASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 AC015656.1-201ENST00000624209 3578 ntBASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 TEKT4P2-202ENST00000559466 1312 ntBASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 AC138761.6-201ENST00000583997 1423 ntBASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 AL136379.1-201ENST00000623471 2642 ntBASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 COQ10BP2-201ENST00000513804 724 ntBASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 MIR4265-201ENST00000582152 99 ntBASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 PYY2-201ENST00000315776 282 ntBASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 GUSBP10-201ENST00000417412 665 ntBASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 AL592076.1-201ENST00000424448 303 ntBASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 AL627422.1-201ENST00000434104 580 ntBASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 FOS-204ENST00000554617 796 ntTSL 2 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 AC103810.10-201ENST00000606504 343 ntBASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC19.06■□□□□ 0.64
NPC1L1Q9UHC9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 GOLGA8UP-201ENST00000527159 1755 ntBASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 RPL3P2-204ENST00000413027 1203 ntBASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 AC092573.1-201ENST00000433054 884 ntBASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 ERP29P1-201ENST00000442902 706 ntBASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 SCARNA12-201ENST00000459155 270 ntBASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 AC132825.4-202ENST00000578792 434 ntBASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms