Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MMP25Q9NPA2 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.42□□□□□ -0.26
MMP25Q9NPA2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP25Q9NPA2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP25Q9NPA2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
MMP25Q9NPA2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
MMP25Q9NPA2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP25Q9NPA2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 AL161932.2-201ENST00000435436 679 ntBASIC13.41□□□□□ -0.26
MMP25Q9NPA2 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 AC234782.1-201ENST00000451950 919 ntBASIC13.41□□□□□ -0.26
MMP25Q9NPA2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 MIR3907-201ENST00000579424 151 ntBASIC13.41□□□□□ -0.26
MMP25Q9NPA2 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 AC012044.1-201ENST00000603431 297 ntBASIC13.41□□□□□ -0.26
MMP25Q9NPA2 AC090386.2-201ENST00000623010 1039 ntBASIC13.41□□□□□ -0.26
MMP25Q9NPA2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 C8orf49-201ENST00000525043 1968 ntBASIC13.41□□□□□ -0.26
MMP25Q9NPA2 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP25Q9NPA2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 RNA5SP359-201ENST00000364838 113 ntBASIC13.4□□□□□ -0.26
MMP25Q9NPA2 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.4□□□□□ -0.26
MMP25Q9NPA2 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms