Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 NQO2-204ENST00000380454 851 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 AC103592.1-201ENST00000394513 664 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 AC004522.1-201ENST00000419978 654 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 AC136604.1-202ENST00000425471 771 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 AC092810.2-201ENST00000431570 362 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 SERBP1P2-201ENST00000436888 1164 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 KRT18P62-201ENST00000446618 1287 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 HNRNPA1P42-201ENST00000458678 957 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 ALG1L7P-201ENST00000502317 768 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 AC113347.2-201ENST00000512350 279 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 MIR4746-201ENST00000579802 71 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 AC006116.2-201ENST00000589958 988 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 URAHP-205ENST00000610227 398 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 Z98885.3-201ENST00000624882 1757 ntBASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-1Q9BYQ7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 DUT-208ENST00000559540 1441 ntTSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-1Q9BYQ7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms