Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
VRK1Q99986 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
VRK1Q99986 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
VRK1Q99986 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
VRK1Q99986 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.9□□□□□ -0.34
VRK1Q99986 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.9□□□□□ -0.34
VRK1Q99986 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.9□□□□□ -0.34
VRK1Q99986 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
VRK1Q99986 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VRK1Q99986 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.9□□□□□ -0.34
VRK1Q99986 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.9□□□□□ -0.34
VRK1Q99986 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VRK1Q99986 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.9□□□□□ -0.34
VRK1Q99986 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.9□□□□□ -0.34
VRK1Q99986 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.9□□□□□ -0.34
VRK1Q99986 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 EIF3FP3-201ENST00000434851 1086 ntBASIC12.9□□□□□ -0.34
VRK1Q99986 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.9□□□□□ -0.34
VRK1Q99986 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
VRK1Q99986 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
VRK1Q99986 AP006547.1-201ENST00000563435 692 ntBASIC12.9□□□□□ -0.34
VRK1Q99986 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.9□□□□□ -0.34
VRK1Q99986 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.9□□□□□ -0.34
VRK1Q99986 AL118558.3-201ENST00000607414 1079 ntBASIC12.9□□□□□ -0.34
VRK1Q99986 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
VRK1Q99986 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.9□□□□□ -0.34
VRK1Q99986 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.9□□□□□ -0.34
VRK1Q99986 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.9□□□□□ -0.34
VRK1Q99986 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.9□□□□□ -0.34
VRK1Q99986 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 AC131212.3-201ENST00000624087 4219 ntBASIC12.9□□□□□ -0.34
VRK1Q99986 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.9□□□□□ -0.34
VRK1Q99986 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
VRK1Q99986 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.9□□□□□ -0.34
VRK1Q99986 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.9□□□□□ -0.35
VRK1Q99986 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.89□□□□□ -0.35
VRK1Q99986 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.89□□□□□ -0.35
VRK1Q99986 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
VRK1Q99986 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.89□□□□□ -0.35
VRK1Q99986 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
VRK1Q99986 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.89□□□□□ -0.35
VRK1Q99986 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 AL157414.3-201ENST00000624276 1954 ntBASIC12.89□□□□□ -0.35
VRK1Q99986 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.89□□□□□ -0.35
VRK1Q99986 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.89□□□□□ -0.35
VRK1Q99986 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.89□□□□□ -0.35
VRK1Q99986 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.89□□□□□ -0.35
VRK1Q99986 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.89□□□□□ -0.35
VRK1Q99986 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.89□□□□□ -0.35
VRK1Q99986 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.89□□□□□ -0.35
VRK1Q99986 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.89□□□□□ -0.35
VRK1Q99986 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.89□□□□□ -0.35
VRK1Q99986 MTX1P1-201ENST00000440904 838 ntBASIC12.89□□□□□ -0.35
VRK1Q99986 COX5BP1-201ENST00000507622 393 ntBASIC12.89□□□□□ -0.35
VRK1Q99986 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.89□□□□□ -0.35
VRK1Q99986 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
VRK1Q99986 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms